RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 NFKB1P19838 968 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 POU3F2P20265 443 aaPredicted RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 CTNNA2P26232 953 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 ELAVL4P26378 380 aaKnown RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 SPAM1P38567 509 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 HADHAP40939 763 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 HALP42357 657 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 DYNLT1P63172 113 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 PRPSAP1Q14558 356 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 NOMO1Q15155 1222 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 ATP13A5Q4VNC0 1218 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 SIRPB2Q5JXA9 342 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 DEPDC1Q5TB30 811 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 PAPD7Q5XG87 772 aaKnown RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 AMZ2Q86W34 360 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 TMEM126BQ8IUX1 230 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 ZNF547Q8IVP9 402 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 FAM20CQ8IXL6 584 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 SYCE1Q8N0S2 351 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 CISD2Q8N5K1 135 aaKnown RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 GOLM1Q8NBJ4 401 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 TTC13Q8NBP0 860 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 CFAP61Q8NHU2 1237 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 EPS8L3Q8TE67 593 aaKnown RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 LRRN4Q8WUT4 740 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 PNPLA2Q96AD5 504 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 SNRNP40Q96DI7 357 aaKnown RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 NRBF2Q96F24 287 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 LINC00615Q96LM1 132 aaPredicted RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 MAP3K3Q99759 626 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 HGH1Q9BTY7 390 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 FSD1LQ9BXM9 530 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 GBA3Q9H227 469 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 PLSCR2Q9NRY7 297 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 FGF21Q9NSA1 209 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 ASF1BQ9NVP2 202 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.31□□□□□ -1.08
GPC6-202ENST00000617456 ZNF69Q9UC07 566 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 ATPIF1Q9UII2 106 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 ACSL5Q9ULC5 683 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 SNX7Q9UNH6 387 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 POLEQ07864 2286 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 F8P00451 2351 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 SPTBP11277 2137 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 CSMD1Q96PZ7 3565 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 SEC16AO15027 2179 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 GLYATL1P3A0A0U1RQE8 302 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 C17orf113A0A1B0GUU1 675 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 A0A1B0GVG6 124 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 ARHGAP10A1A4S6 786 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 ANKUB1A6NFN9 424 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 WIPF3A6NGB9 483 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 A6NJY4 79 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 HNRNPCL2B2RXH8 293 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 DDX3YO15523 660 aaKnown RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 HNRNPCL1O60812 293 aaKnown RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 CPNE3O75131 537 aaKnown RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 SCRG1O75711 98 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 CEACAM4O75871 244 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 TMEM63AO94886 807 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 CRTAMO95727 393 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 LPOP22079 712 aaPredicted RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 VARSP26640 1264 aaKnown RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 ADRA1AP35348 466 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 CASP2P42575 452 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 MTTPP55157 894 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 ITGA1P56199 1179 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 AP2B1P63010 937 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 ACY1Q03154 408 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 E2F2Q14209 437 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 ELOAQ14241 798 aaKnown RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 MAPRE2Q15555 327 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 TAF1AQ15573 450 aaPredicted RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 GPR19Q15760 415 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 PCSK7Q16549 785 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 KYNUQ16719 465 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 BBS9Q3SYG4 887 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 PLEKHN1Q494U1 663 aaPredicted RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 GPR33Q49SQ1 333 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 PDCD4Q53EL6 469 aaKnown RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 ARMC4Q5T2S8 1044 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 PRAMEF17Q5VTA0 474 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 METRNLQ641Q3 311 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 LCN10Q6JVE6 187 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 C8orf74Q6P047 294 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 UNC5DQ6UXZ4 953 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 GLT6D1Q7Z4J2 308 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 ZC3H18Q86VM9 953 aaKnown RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 KMT5CQ86Y97 462 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 CDKL3Q8IVW4 592 aaPredicted RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 ENDOVQ8N8Q3 282 aaKnown RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 WDR60Q8WVS4 1066 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 GFM2Q969S9 779 aaKnown RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 OXNAD1Q96HP4 312 aaPredicted RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 SLC41A2Q96JW4 573 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 SERINC2Q96SA4 455 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 CD180Q99467 661 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 CEP41Q9BYV8 373 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 OSBPL8Q9BZF1 889 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 CHST8Q9H2A9 424 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms