RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TTLL2Q9BWV7 592 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 NLNQ9BYT8 704 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SGK2Q9HBY8 427 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ITM2CQ9NQX7 267 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 OLAHQ9NV23 265 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF510Q9Y2H8 683 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 MCM3APO60318 1980 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CLDN25C9JDP6 229 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZDHHC11BP0C7U3 371 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 DBTP11182 482 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 IL7RP16871 459 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 FPR1P21462 350 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CHI3L1P36222 383 aaPredicted RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 HPCAL1P37235 193 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 DEFA1P59665 94 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 DEFA3P59666 94 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 RGS21Q2M5E4 152 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CARD16Q5EG05 197 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZDHHC20Q5W0Z9 365 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZFAND4Q86XD8 727 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 RAVER1Q8IY67 606 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 APCDD1Q8J025 514 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMCO5AQ8N6Q1 288 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 GPR26Q8NDV2 337 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SMG7Q92540 1137 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CD244Q9BZW8 370 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TPK1Q9H3S4 243 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 DDX28Q9NUL7 540 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ENOPH1Q9UHY7 261 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 DLGAP4Q9Y2H0 992 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TDRKHQ9Y2W6 561 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 FAM220BPB1ANY3 271 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ARNTLO00327 626 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PI15O43692 258 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CBFA2T3O75081 653 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 MED26O95402 600 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 SERPINA1P01009 418 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 OPN1SWP03999 348 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 C8BP07358 591 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CHRM1P11229 460 aaPredicted RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 MYCLP1P12525 358 aaPredicted RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 DCTP40126 519 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CTSKP43235 329 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PREPP48147 710 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PRMT2P55345 433 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ARF5P84085 180 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 LAPTM5Q13571 262 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TIMM50Q3ZCQ8 353 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TRIM60Q495X7 471 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PDE12Q6L8Q7 609 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 NOXRED1Q6NXP6 359 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 TAS1R1Q7RTX1 841 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF605Q86T29 641 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZC3H7AQ8IWR0 971 aaKnown RBP5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 CFAP206Q8IYR0 622 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 KRT78Q8N1N4 520 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 DNAJB8Q8NHS0 232 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PIH1D2Q8WWB5 315 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 PROX1Q92786 737 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 NELL1Q92832 810 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 OTULINQ96BN8 352 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ERLEC1Q96DZ1 483 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF583Q96ND8 569 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 WNT6Q9Y6F9 365 aa5.5□□□□□ -1.53
SYNCRIP-204ENST00000616122 UNC13CQ8NB66 2214 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 H0Y858 1186 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 C7P10643 843 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 RPL10P27635 214 aaKnown RBP5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 RPL3P39023 403 aaKnown RBP5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 LMAN2Q12907 356 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 TOP3AQ13472 1001 aaPredicted RBP5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 PDCD4Q53EL6 469 aaKnown RBP5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 CYHR1Q6ZMK1 362 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 MBOAT1Q6ZNC8 495 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 R3HCC1LQ7Z5L2 792 aaKnown RBP5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 TRIM69Q86WT6 500 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 YAF2Q8IY57 180 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 TBC1D19Q8N5T2 526 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 MCFD2Q8NI22 146 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 STON2Q8WXE9 905 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF514Q96K75 400 aaPredicted RBP5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 QRFPRQ96P65 431 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 VPS35Q96QK1 796 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 TOR3AQ9H497 397 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 RAD18Q9NS91 495 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 NRAPQ86VF7 1730 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 UPK3BL1B0FP48 263 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 UPK3BL2E5RIL1 263 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 TOR1BO14657 336 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 KDM1AO60341 852 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 ACRP10323 421 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 ALDH4A1P30038 563 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 CTNNB1P35222 781 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 KRT20P35900 424 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 CLDN8P56748 225 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 CYP4F2P78329 520 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 DGUOKQ16854 277 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 GALNT10Q86SR1 603 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 PELI3Q8N2H9 469 aa5.49□□□□□ -1.53
SYNCRIP-204ENST00000616122 PIK3C3Q8NEB9 887 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms