RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 TEX22C9J3V5 150 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 NDUFS8O00217 210 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 CLDN3O15551 220 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 PLRG1O43660 514 aaKnown RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KLK8O60259 260 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 HSF2BPO75031 334 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 NDUFS7O75251 213 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 AVILO75366 819 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 MTX2O75431 263 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ERLIN1O75477 346 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TADA2AO75478 443 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KDM4BO94953 1096 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KCNK5O95279 499 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 CLDN14O95500 239 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 DIRAS3O95661 229 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 FGFR1OPO95684 399 aaKnown RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 MT-CYBP00156 380 aaPredicted RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 MT-ATP6P00846 226 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 NPPAP01160 153 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 HEXAP06865 529 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 SP1P08047 785 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 CYC1P08574 325 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 HOXB5P09067 269 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 POLR2MP0CAP2 368 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 UROSP10746 265 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KRT3P12035 628 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 COX7A2P14406 83 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 NCF1P14598 390 aaPredicted RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ETS1P14921 441 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ALDH4A1P30038 563 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 CHRNA3P32297 505 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 STX2P32856 288 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 NF2P35240 595 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 PIGAP37287 484 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 PBX3P40426 434 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 MAGEA8P43361 318 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ARCN1P48444 511 aaKnown RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 PITPNBP48739 271 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 MAP3K7CLP57077 242 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 CLDN2P57739 230 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 SEC61BP60468 96 aaKnown RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ST8SIA6P61647 398 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 UFM1P61960 85 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TRA2BP62995 288 aaKnown RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 EFNB1P98172 346 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TMEM115Q12893 351 aaPredicted RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ZNF155Q12901 538 aaPredicted RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 IL24Q13007 206 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TRA2AQ13595 282 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 DDX39BQ13838 428 aaKnown RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 IDI1Q13907 227 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 VEPH1Q14D04 833 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 EFTUD2Q15029 972 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 DPYSL2Q16555 572 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TAZQ16635 292 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 HIST2H2ACQ16777 129 aaPredicted RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 UGP2Q16851 508 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 SYT16Q17RD7 645 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KRT24Q2M2I5 525 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TCTN1Q2MV58 587 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ZSCAN23Q3MJ62 389 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KCTD21Q4G0X4 260 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KLHL26Q53HC5 615 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ZNF766Q5HY98 468 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ZNF667Q5HYK9 610 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 CFAP157Q5JU67 520 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TMEM81Q6P7N7 255 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 METAP1DQ6UB28 335 aaPredicted RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ISLR2Q6UXK2 745 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KIF6Q6ZMV9 814 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 FOXL2NBQ6ZUU3 175 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KCTD9Q7L273 389 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 LINGO2Q7L985 606 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 HAUS6Q7Z4H7 955 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 SPATA19Q7Z5L4 167 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 DSG4Q86SJ6 1040 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 GPAT4Q86UL3 456 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 KBTBD6Q86V97 674 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 IQCHQ86VS3 1027 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 MFN1Q8IWA4 741 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TIGD4Q8IY51 512 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 BATF2Q8N1L9 274 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 NIPA2Q8N8Q9 360 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 GBP7Q8N8V2 638 aaPredicted RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 IL17RCQ8NAC3 791 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 XXYLT1Q8NBI6 393 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 LEMD2Q8NC56 503 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 RBM15BQ8NDT2 890 aaKnown RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 BEST2Q8NFU1 509 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 OR8K5Q8NH50 307 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 FIG4Q92562 907 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ARHGAP45Q92619 1136 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 CORO2AQ92828 525 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TANKQ92844 425 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 CD101Q93033 1021 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ERGIC1Q969X5 290 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 LRRC59Q96AG4 307 aaKnown RBP2.53□□□□□ -2
HMGB1P24-202ENST00000615653 PTERQ96BW5 349 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TMCO6Q96DC7 493 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 C11orf24Q96F05 449 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms