RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PUS10Q3MIT2 529 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 NAT8LQ8N9F0 302 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TMIEQ8NEW7 156 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 NXPE2Q96DL1 559 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 MFSD3Q96ES6 412 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TTYH1Q9H313 450 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 SMOC2Q9H3U7 446 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 DPEP3Q9H4B8 488 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SIX2Q9NPC8 291 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 B3GAT2Q9NPZ5 323 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 DTLQ9NZJ0 730 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 FKBPLQ9UIM3 349 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 N4BP2Q86UW6 1770 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 ELOA3DA6NLF2 546 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 WASHC1A8K0Z3 465 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 WASH3PC4AMC7 463 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 HLA-DQB2P05538 268 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ZNF30P17039 623 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 AOC1P19801 751 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PRMT2P55345 433 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CCL23P55773 120 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SCRN3Q0VDG4 424 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 MERTKQ12866 999 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ELOA3BQ3SY89 546 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CARD16Q5EG05 197 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 WASH2PQ6VEQ5 465 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 LBX2Q6XYB7 198 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TIFABQ6ZNK6 161 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ANKRD46Q86W74 232 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ELOA3Q8NG57 546 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PCDH19Q8TAB3 1148 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PSMG2Q969U7 264 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PNPLA2Q96AD5 504 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TRIB3Q96RU7 358 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 MAPKAP1Q9BPZ7 522 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CCM2Q9BSQ5 444 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 DERL2Q9GZP9 239 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 RNF19AQ9NV58 838 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 VPS29Q9UBQ0 182 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 COQ4Q9Y3A0 265 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 WNT9AO14904 365 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ECI2O75521 394 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 FESP07332 822 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CPN2P22792 545 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 MSX2P35548 267 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 SP2Q02086 613 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 KHDC1Q4VXA5 237 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 RFWD3Q6PCD5 774 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 EPGNQ6UW88 154 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PYROXD2Q8N2H3 581 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 NXPE1Q8N323 547 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 OR2L3Q8NG85 312 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 OR10G2Q8NGC3 310 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SPATA22Q8NHS9 363 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 FAM84AQ96KN4 292 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D17Q9HA65 648 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 GOLGA2P5Q9HBQ8 144 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 POLMQ9NP87 494 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 OSER1Q9NX31 292 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 GDAP2Q9NXN4 497 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 PTBP2Q9UKA9 531 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 KCPQ6ZWJ8 1503 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 KANTRA0A1W2PQU2 76 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TLR4O00206 839 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 WNT7AO00755 349 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SMPD1P17405 629 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ERP29P30040 261 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 ACADVLP49748 655 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 DSTNP60981 165 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CSTF1Q05048 431 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.47□□□□□ -1.693e-6■■■□□ 17.7
CHD9-221ENST00000615216 CDCA2Q69YH5 1023 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 PYHIN1Q6K0P9 492 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 FIP1L1Q6UN15 594 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 TFAP2BQ92481 460 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CMTM7Q96FZ5 175 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SLC38A3Q99624 504 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ABCB9Q9NP78 766 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CLEC4AQ9UMR7 237 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 KIF13AQ9H1H9 1805 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TMEM150CB9EJG8 249 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 FAM189A1O60320 539 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 SLC2A2P11168 524 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 NCK1P16333 377 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 RFC2P35250 354 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 GJA8P48165 433 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 OR2B6P58173 313 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 IRF9Q00978 393 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 CACNA1SQ13698 1873 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ATAT1Q5SQI0 421 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 UBAP2Q5T6F2 1119 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 BAIAP2L2Q6UXY1 529 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 TMCO2Q7Z6W1 182 aaPredicted RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 TIAM2Q8IVF5 1701 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 ARMC10Q8N2F6 343 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 C7orf57Q8NEG2 295 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 OR8H1Q8NGG4 311 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 NDRG1Q92597 394 aaKnown RBP4.47□□□□□ -1.69
CHD9-221ENST00000615216 ZSWIM3Q96MP5 696 aa4.47□□□□□ -1.69
CHD9-221ENST00000615216 GAS2L1Q99501 681 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms