RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 GBP5Q96PP8 586 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 SPRTNQ9H040 489 aaPredicted RBP11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 CHRAC1Q9NRG0 131 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 EURLQ9NYK6 297 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 IL1RAPL1Q9NZN1 696 aa11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 PTRH2Q9Y3E5 179 aaKnown RBP11.69□□□□□ -0.54
PDLIM2-218ENST00000614502 ITPR2Q14571 2701 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 MDC1Q14676 2089 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 TARM1B6A8C7 271 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 H3BMM5 538 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 KLF7O75840 302 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 SORBS2O94875 1100 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 ALBP02768 609 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 TPBGLP0DKB5 382 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 TCP1P17987 556 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 MAGP20916 626 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 RPL22P35268 128 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 GRIA1P42261 906 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 ATP1A4Q13733 1029 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 GRM7Q14831 915 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 SF1Q15637 639 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 ZIC1Q15915 447 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 CYP1B1Q16678 543 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 CYP2A13Q16696 494 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 FAM214AQ32MH5 1076 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 NADK2Q4G0N4 442 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 NKAIN1Q4KMZ8 207 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 C4orf17Q53FE4 359 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 RNF187Q5TA31 235 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 C1orf189Q5VU69 101 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 MRNIPQ6NTE8 343 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 JMJD6Q6NYC1 403 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 MRPL14Q6P1L8 145 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 OTOAQ7RTW8 1153 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 MRGPREQ86SM8 312 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 PRUNE1Q86TP1 453 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 TTC29Q8NA56 475 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 CFAP61Q8NHU2 1237 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 FKBP10Q96AY3 582 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 ZNF778Q96MU6 729 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 NAP1L3Q99457 506 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 NRTNQ99748 197 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 NUDT9Q9BW91 350 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 MRM3Q9HC36 420 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 LRRC4CQ9HCJ2 640 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 NXT1Q9UKK6 140 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 PLAGL1Q9UM63 463 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 CDYLQ9Y232 598 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 VPS9D1Q9Y2B5 631 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 MAP4K5Q9Y4K4 846 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 PCSK5Q92824 1860 aa11.68□□□□□ -0.54
PDLIM2-218ENST00000614502 CENPEQ02224 2701 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 A0A1B0GX78 115 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 A6NL46 340 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 PGRMC1O00264 195 aaKnown RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 SRPX2O60687 465 aaPredicted RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 ZSCAN5DPP0CG00 497 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 ITGAXP20702 1163 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 ALAS2P22557 587 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 PEBP1P30086 187 aaKnown RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 SESN2P58004 480 aaPredicted RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 SEMA3AQ14563 771 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 MYBPC3Q14896 1274 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 INPP5JQ15735 1006 aaPredicted RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 DCAF10Q5QP82 559 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 LRRC8BQ6P9F7 803 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 FIGLAQ6QHK4 219 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 MICALCLQ6ZW33 695 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 MCATQ8IVS2 390 aaKnown RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 OTUD6BQ8N6M0 293 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 SKA2Q8WVK7 121 aaPredicted RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 MAGOHBQ96A72 148 aaKnown RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 TCF12Q99081 682 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 P2RY12Q9H244 342 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 ATP13A2Q9NQ11 1180 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 ENAMQ9NRM1 1142 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 TREX1Q9NSU2 369 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 DHCR7Q9UBM7 475 aaKnown RBP11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 FAM169AQ9Y6X4 670 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 CREBBPQ92793 2442 aa11.67□□□□□ -0.54
PDLIM2-218ENST00000614502 IQCF5A8MTL0 148 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 AGPSO00116 658 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 DSCR3O14972 297 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 FANCGO15287 622 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 AGFG2O95081 481 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 ONECUT2O95948 504 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 PAMP19021 973 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 TPSB2P20231 275 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 COILP38432 576 aaPredicted RBP11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 SOX8P57073 446 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 AIMP2Q13155 320 aaKnown RBP11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 TPSAB1Q15661 275 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 PRR30Q53SZ7 412 aaPredicted RBP11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 FAM69BQ5VUD6 431 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 IRAK1BP1Q5VVH5 260 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 SLC6A19Q695T7 634 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 TTC27Q6P3X3 843 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 TTLL10Q6ZVT0 673 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms