RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 EGFL8Q99944 293 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 TMEM79Q9BSE2 394 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 GSDMCQ9BYG8 508 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 TMEM168Q9H0V1 697 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 OSGEPL1Q9H4B0 414 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 GSTO2Q9H4Y5 243 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 ARL15Q9NXU5 204 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 UTP6Q9NYH9 597 aaKnown RBP11.11□□□□□ -0.63
SLIRP-212ENST00000613856 HAO1Q9UJM8 370 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 PLEKHM1Q9Y4G2 1056 aa11.11□□□□□ -0.63
SLIRP-212ENST00000613856 MYO18BQ8IUG5 2567 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 NCF1BA6NI72 391 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 PDZK1P1A8MUH7 402 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 NCF1CA8MVU1 366 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 TAPBPO15533 448 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 ABCB7O75027 752 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 GUCA1CO95843 209 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 FAM107AO95990 144 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 NCF1P14598 390 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 DRD4P21917 467 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 EEF1DP29692 281 aaKnown RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 ARRB2P32121 409 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 ACTR1BP42025 376 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 HALP42357 657 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 SLC6A12P48065 614 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 SEC24CP53992 1094 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 ACTR1AP61163 376 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 GABPB1Q06547 395 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 CFAP157Q5JU67 520 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 ANKS6Q68DC2 871 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 LRRC70Q7Z2Q7 622 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 RD3Q7Z3Z2 195 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 ZNF605Q86T29 641 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 TBC1D21Q8IYX1 336 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 KIRREL3Q8IZU9 778 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 GALNT15Q8N3T1 639 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 CFAP61Q8NHU2 1237 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 TFGQ92734 400 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 RAD51AP1Q96B01 352 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 GRAMD1AQ96CP6 724 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 SORT1Q99523 831 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 TRIT1Q9H3H1 467 aaKnown RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 MVB12BQ9H7P6 319 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 ERVMER34-1Q9H9K5 563 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 SLCO1B3Q9NPD5 702 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 FGFR1OP2Q9NVK5 253 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 WWOXQ9NZC7 414 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 SPATA7Q9P0W8 599 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 APOBEC3BQ9UH17 382 aaKnown RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 KLF15Q9UIH9 416 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 PCTPQ9UKL6 214 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 ASF1AQ9Y294 204 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 STK38LQ9Y2H1 464 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 WDR37Q9Y2I8 494 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-212ENST00000613856 HEBP2Q9Y5Z4 205 aa11.1□□□□□ -0.63
SLIRP-212ENST00000613856 E2F3O00716 465 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 ITM2AO43736 263 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 SUPT7LO94864 414 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 SIX3O95343 332 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-212ENST00000613856 TGDSO95455 350 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 HSPA4LO95757 839 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 ERGP11308 486 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 MTHFD1P11586 935 aaKnown RBP11.09□□□□□ -0.63
SLIRP-212ENST00000613856 F3P13726 295 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 JUNDP17535 347 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 AK4P27144 223 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-212ENST00000613856 RPL10P27635 214 aaKnown RBP11.09□□□□□ -0.63
SLIRP-212ENST00000613856 NDUFS1P28331 727 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 HSD17B2P37059 387 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 PIK3CGP48736 1102 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 AGTR2P50052 363 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 HK2P52789 917 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 C21orf59P57076 290 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 PRKAA1Q13131 559 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 GRB7Q14451 532 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 ARHGAP19Q14CB8 494 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 MBOAT1Q6ZNC8 495 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 GATAD2AQ86YP4 633 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 CRLF3Q8IUI8 442 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 LSMEM2Q8N112 164 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 SDR16C5Q8N3Y7 309 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 CCNYL1Q8N7R7 359 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 PHC3Q8NDX5 983 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 OR5AR1Q8NGP9 310 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 OR9A1PQ8NGU1 263 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 CCL4L1Q8NHW4 92 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 PPP4R1Q8TF05 950 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 C12orf66Q96MD2 445 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 INSM2Q96T92 566 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-212ENST00000613856 PKP4Q99569 1192 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 CDC6Q99741 560 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 LRRC61Q9BV99 259 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 PITPNM3Q9BZ71 974 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 CD244Q9BZW8 370 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 C20orf27Q9GZN8 174 aa11.09□□□□□ -0.63
SLIRP-212ENST00000613856 TCEAL2Q9H3H9 227 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms