RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 H0YJX3 145 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CSNK2A2P19784 350 aaPredicted RBP17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 MAGEA2P43356 314 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CEBPGP53567 150 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 IST1P53990 364 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 TARDBPQ13148 414 aaKnown RBP eCLIP17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CMASQ8NFW8 434 aaPredicted RBP17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 SLC39A3Q9BRY0 314 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 ITPAQ9BY32 194 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 TVP23BQ9NYZ1 205 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 PTBP2Q9UKA9 531 aaKnown RBP17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CDC14AQ9UNH5 594 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 MED31Q9Y3C7 131 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 PCDHGB2Q9Y5G2 931 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 NFKB2Q00653 900 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 DNM1P34Q6PK57 102 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 ABHD13Q7L211 337 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 GET4Q7L5D6 327 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 GALNTL5Q7Z4T8 443 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 AMZ2Q86W34 360 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 SPERTQ8NA61 448 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 ZNF527Q8NB42 609 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 NDRG1Q92597 394 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 CHMP1AQ9HD42 196 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 SALL4Q9UJQ4 1053 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 ZDHHC24Q6UX98 284 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 NCSTNQ92542 709 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 RFT1Q96AA3 541 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 POLR2J2Q9GZM3 115 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 MRM3Q9HC36 420 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 ACSS2Q9NR19 701 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 MRC1P22897 1456 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 ZNF3P17036 446 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 XKP51811 444 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 SLC10A6Q3KNW5 377 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 OR2L3Q8NG85 312 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 VPS29Q9UBQ0 182 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 M0QX08 132 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 ENTPD6O75354 484 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 DSTNP60981 165 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 CSTF1Q05048 431 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 C6orf89Q6UWU4 347 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 HERVK_113Q902F9 699 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 RGMAQ96B86 450 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 ZSCAN5AQ9BUG6 496 aa17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 POLMQ9NP87 494 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-206ENST00000613459 A0A0G2JPF8 293 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 HNRNPCL3B7ZW38 293 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 TMEM150CB9EJG8 249 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 GNB5O14775 395 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 HNRNPCL4P0DMR1 293 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 FMO3P31513 532 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 C1QTNF8P60827 252 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 KLHL26Q53HC5 615 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 NIPAL1Q6NVV3 410 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 SLC32A1Q9H598 525 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 NUP50Q9UKX7 468 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 CCKBRP32239 447 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 COLEC12Q5KU26 742 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 SDR16C5Q8N3Y7 309 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 CEP76Q8TAP6 659 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 LRRC58Q96CX6 371 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 PCDHGB6Q9Y5F9 930 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 SEPT4O43236 478 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 CLPXO76031 633 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 CCSAPQ6IQ19 270 aaPredicted RBP17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 SYVN1Q86TM6 617 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 CCDC54Q8NEL0 328 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 CMTM7Q96FZ5 175 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 WRAP53Q9BUR4 548 aaKnown RBP17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 COMMD3Q9UBI1 195 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 NKX1-2Q9UD57 310 aaPredicted RBP17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 ABCG2Q9UNQ0 655 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 TOR1BO14657 336 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 ATP4BP51164 291 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 SP2Q02086 613 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 TLR1Q15399 786 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 NPTX1Q15818 432 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 UBAP2Q5T6F2 1119 aaKnown RBP17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 TIFABQ6ZNK6 161 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 ANKRD46Q86W74 232 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 NUS1Q96E22 293 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 MND1Q9BWT6 205 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 CHIAQ9BZP6 476 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 TMEM9Q9P0T7 183 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 SLIT2O94813 1529 aa17.03■□□□□ 0.32
HMGXB3-206ENST00000613459 EI24O14681 340 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 UGT1A9O60656 530 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 COQ9O75208 318 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 RCBTB2O95199 551 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 UGT1A6P19224 532 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 UGT1A1P22309 533 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 UGT1A4P22310 534 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 GDF10P55107 478 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 SP140Q13342 867 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 NADK2Q4G0N4 442 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 ARMC10Q8N2F6 343 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 ZBTB8BQ8NAP8 495 aaPredicted RBP17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 IKZF4Q9H2S9 585 aa17.02■□□□□ 0.32
HMGXB3-206ENST00000613459 UGT1A7Q9HAW7 530 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms