RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ZFYVE19Q96K21 471 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 LYSMD1Q96S90 227 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 GDF15Q99988 308 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 OSBPL6Q9BZF3 934 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 POLR1BQ9H9Y6 1135 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 DNAJB9Q9UBS3 223 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 ZNHIT2Q9UHR6 403 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 MANBAO00462 879 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 SCELO95171 688 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 CLDN7O95471 211 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 CYP17A1P05093 508 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 CBSLP0DN79 551 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 EPB42P16452 691 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 JUNBP17275 347 aaPredicted RBP14.32□□□□□ -0.12
CDH1-213ENST00000612417 HOXB6P17509 224 aaKnown RBP14.32□□□□□ -0.12
CDH1-213ENST00000612417 CBSP35520 551 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 HNF1BP35680 557 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 SPAM1P38567 509 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 GDF5P43026 501 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 EPS8Q12929 822 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 TTLL9Q3SXZ7 439 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 RUNDC3AQ59EK9 446 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 TCEAL5Q5H9L2 206 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 GRAMD4Q6IC98 578 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 KCTD8Q6ZWB6 473 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 ZDHHC13Q8IUH4 622 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 CROCCP3Q8IVE0 287 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 NXPE1Q8N323 547 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 SVOPLQ8N434 492 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 LIX1Q8N485 282 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 PJA1Q8NG27 643 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 CYB5D2Q8WUJ1 264 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 SORCS1Q8WY21 1168 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 ASB16Q96NS5 453 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 MUS81Q96NY9 551 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 ZDHHC6Q9H6R6 413 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 CARS2Q9HA77 564 aaKnown RBP14.32□□□□□ -0.12
CDH1-213ENST00000612417 LRTM1Q9HBL6 345 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 FARSBQ9NSD9 589 aaKnown RBP14.32□□□□□ -0.12
CDH1-213ENST00000612417 SLC25A37Q9NYZ2 338 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 USE1Q9NZ43 259 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 KLQ9UEF7 1012 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 CRLS1Q9UJA2 301 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 ZNF490Q9ULM2 529 aaPredicted RBP14.32□□□□□ -0.12
CDH1-213ENST00000612417 CXorf51AA0A1B0GTR3 108 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 ELOVL7A1L3X0 281 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 H3BMQ9 156 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 EIF3FO00303 357 aaPredicted RBP14.32□□□□□ -0.12
CDH1-213ENST00000612417 FFAR3O14843 346 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 GPR42O15529 346 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 LINC01565O15544 149 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 RETP07949 1114 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 IL1RNP18510 177 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 HMGCS1Q01581 520 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 PLCL1Q15111 1095 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 CHRNA6Q15825 494 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 USP39Q53GS9 565 aaKnown RBP14.32□□□□□ -0.12
CDH1-213ENST00000612417 CARD16Q5EG05 197 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 SPANXN4Q5MJ08 99 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 ATG9BQ674R7 924 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 Q6ZVU0 165 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 GPR149Q86SP6 731 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 PLPP6Q8IY26 295 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 RGL4Q8IZJ4 473 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 FAM86B1Q8N7N1 296 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 OR10A6Q8NH74 314 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 FIG4Q92562 907 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 COG8Q96MW5 612 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 CEP44Q9C0F1 390 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 IKZF5Q9H5V7 419 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 C1orf109Q9NX04 203 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.32□□□□□ -0.12
CDH1-213ENST00000612417 ERVW-1Q9UQF0 538 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 GMEB1Q9Y692 573 aa14.32□□□□□ -0.12
CDH1-213ENST00000612417 A0A0J9YVX5 310 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 HEPACAM2A8MVW5 462 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 A8MX80 341 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 LOC730098B7Z3J9 87 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 G3V2T6 193 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 GSTA4O15217 222 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 STK16O75716 305 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 POP4O95707 220 aaKnown RBP14.31□□□□□ -0.12
CDH1-213ENST00000612417 BMP1P13497 986 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 PCSK2P16519 638 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 UGT1A1P22309 533 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 UGT1A4P22310 534 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 UGT1A3P35503 534 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 UGT1A5P35504 534 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 NNMTP40261 264 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 RANBP1P43487 201 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 RECQLP46063 649 aaPredicted RBP14.31□□□□□ -0.12
CDH1-213ENST00000612417 DGKGP49619 791 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 PPP2R2BQ00005 443 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 MYBPC3Q14896 1274 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 IMPG1Q17R60 797 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 RBM48Q5RL73 367 aaKnown RBP14.31□□□□□ -0.12
CDH1-213ENST00000612417 TMEM215Q68D42 235 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 SUSD1Q6UWL2 747 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 ENPP6Q6UWR7 440 aa14.31□□□□□ -0.12
CDH1-213ENST00000612417 DPY19L3Q6ZPD9 716 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms