RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 CCDC68Q9H2F9 335 aa17.51■□□□□ 0.39
VCX3A-203ENST00000612369 ENAMQ9NRM1 1142 aa17.51■□□□□ 0.39
VCX3A-203ENST00000612369 TXLNGQ9NUQ3 528 aa17.51■□□□□ 0.39
VCX3A-203ENST00000612369 IRAK4Q9NWZ3 460 aa17.51■□□□□ 0.39
VCX3A-203ENST00000612369 KLK4Q9Y5K2 254 aa17.51■□□□□ 0.39
VCX3A-203ENST00000612369 FAM169AQ9Y6X4 670 aa17.51■□□□□ 0.39
VCX3A-203ENST00000612369 DNALI1O14645 258 aaPredicted RBP17.5■□□□□ 0.39
VCX3A-203ENST00000612369 CBSLP0DN79 551 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 CBSP35520 551 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 CASRP41180 1078 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 BDKRB1P46663 353 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 CSRP3P50461 194 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 ARSFP54793 590 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 KCNC4Q03721 635 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 KLRB1Q12918 225 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 CTBP1Q13363 440 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 PTK6Q13882 451 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 NAA25Q14CX7 972 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 CYP2A13Q16696 494 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 TCTE1Q5JU00 501 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 YOD1Q5VVQ6 348 aaPredicted RBP17.5■□□□□ 0.39
VCX3A-203ENST00000612369 TAX1BP1Q86VP1 789 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 FAM20CQ8IXL6 584 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 ZNF655Q8N720 491 aaPredicted RBP17.5■□□□□ 0.39
VCX3A-203ENST00000612369 GABPB2Q8TAK5 448 aaPredicted RBP17.5■□□□□ 0.39
VCX3A-203ENST00000612369 IP6K3Q96PC2 410 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 DDX47Q9H0S4 455 aaKnown RBP17.5■□□□□ 0.39
VCX3A-203ENST00000612369 ING2Q9H160 280 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 ACSS2Q9NR19 701 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 FAM114A2Q9NRY5 505 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 C20orf96Q9NUD7 363 aaPredicted RBP17.5■□□□□ 0.39
VCX3A-203ENST00000612369 IL1RAPL1Q9NZN1 696 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 GPN3Q9UHW5 284 aaPredicted RBP17.5■□□□□ 0.39
VCX3A-203ENST00000612369 TP53TG5Q9Y2B4 290 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 TENM4Q6N022 2769 aa17.5■□□□□ 0.39
VCX3A-203ENST00000612369 SRPX2O60687 465 aaPredicted RBP17.49■□□□□ 0.39
VCX3A-203ENST00000612369 PSIP1O75475 530 aaKnown RBP17.49■□□□□ 0.39
VCX3A-203ENST00000612369 CATP04040 527 aaKnown RBP17.49■□□□□ 0.39
VCX3A-203ENST00000612369 ENO3P13929 434 aaPredicted RBP17.49■□□□□ 0.39
VCX3A-203ENST00000612369 PGAM1P18669 254 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 HSD17B2P37059 387 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 CLCN7P51798 805 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 ARHGAP19Q14CB8 494 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 KLHL38Q2WGJ6 581 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 CCSMST1Q4G0I0 132 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 ACSBG2Q5FVE4 666 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 FCRL6Q6DN72 434 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 SYDE1Q6ZW31 735 aaPredicted RBP17.49■□□□□ 0.39
VCX3A-203ENST00000612369 RAB43Q86YS6 212 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 DENND6AQ8IWF6 608 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 AGGF1Q8N302 714 aaeCLIP17.49■□□□□ 0.39
VCX3A-203ENST00000612369 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.49■□□□□ 0.39
VCX3A-203ENST00000612369 OR2A1Q8NGT9 310 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 OR9A1PQ8NGU1 263 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 FAM136AQ96C01 138 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 PDLIM2Q96JY6 352 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 RUNDC3BQ96NL0 473 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 FAM167BQ9BTA0 163 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 NAT9Q9BTE0 207 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 GALPQ9UBC7 116 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 NDOR1Q9UHB4 597 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 ASIC3Q9UHC3 531 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 RUVBL2Q9Y230 463 aaKnown RBP17.49■□□□□ 0.39
VCX3A-203ENST00000612369 KLHL20Q9Y2M5 609 aa17.49■□□□□ 0.39
VCX3A-203ENST00000612369 PCDHGA9Q9Y5G4 932 aaKnown RBP17.49■□□□□ 0.39
VCX3A-203ENST00000612369 ARGFXA6NJG6 315 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 ZNF839A8K0R7 811 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 KLF7O75840 302 aaPredicted RBP17.48■□□□□ 0.39
VCX3A-203ENST00000612369 TTC4O95801 387 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 ERGP11308 486 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 GRIA3P42263 894 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 SLC1A2P43004 574 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 PTGIRP43119 386 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 GCGRP47871 477 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 RRADP55042 308 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 TLE1Q04724 770 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 SSPNQ14714 243 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 MLIPQ5VWP3 458 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 PAPD7Q5XG87 772 aaKnown RBP17.48■□□□□ 0.39
VCX3A-203ENST00000612369 ASB18Q6ZVZ8 466 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 MED25Q71SY5 747 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 TMEM102Q8N9M5 508 aaPredicted RBP17.48■□□□□ 0.39
VCX3A-203ENST00000612369 FBXO15Q8NCQ5 510 aaPredicted RBP17.48■□□□□ 0.39
VCX3A-203ENST00000612369 OR2L3Q8NG85 312 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 ZNF285Q96NJ3 590 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 TRIM55Q9BYV6 548 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 CLMPQ9H6B4 373 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 FBXO6Q9NRD1 293 aaPredicted RBP17.48■□□□□ 0.39
VCX3A-203ENST00000612369 IFT80Q9P2H3 777 aaPredicted RBP17.48■□□□□ 0.39
VCX3A-203ENST00000612369 DHCR7Q9UBM7 475 aaKnown RBP17.48■□□□□ 0.39
VCX3A-203ENST00000612369 FBXO5Q9UKT4 447 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 DHRS7Q9Y394 339 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 PCDHGB7Q9Y5F8 929 aa17.48■□□□□ 0.39
VCX3A-203ENST00000612369 A0A1W2PPV9 198 aa17.47■□□□□ 0.39
VCX3A-203ENST00000612369 ARHGEF33A8MVX0 844 aa17.47■□□□□ 0.39
VCX3A-203ENST00000612369 MYO1CO00159 1063 aa17.47■□□□□ 0.39
VCX3A-203ENST00000612369 SMAPO00193 183 aa17.47■□□□□ 0.39
VCX3A-203ENST00000612369 EIF3FO00303 357 aaPredicted RBP17.47■□□□□ 0.39
VCX3A-203ENST00000612369 DNAJB5O75953 348 aa17.47■□□□□ 0.39
VCX3A-203ENST00000612369 ONECUT2O95948 504 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms