RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 MAP4P27816 1152 aaKnown RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 AOAHP28039 575 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 MAPK10P53779 464 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 KCNAB2Q13303 367 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 BOP1Q14137 746 aaKnown RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 PTCHD3Q3KNS1 767 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 LRRC73Q5JTD7 316 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 ANKRD34AQ69YU3 496 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 C22orf39Q6P5X5 142 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 KLHL35Q6PF15 583 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 CALHM3Q86XJ0 350 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 ZCCHC7Q8N3Z6 543 aaKnown RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 BEND7Q8N7W2 519 aaPredicted RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 PJA1Q8NG27 643 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 MIPOL1Q8TD10 442 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 HDAC2Q92769 488 aaKnown RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 MAN2B2Q9Y2E5 1009 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 PPIL1Q9Y3C6 166 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 TRIM17Q9Y577 477 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 LEFTY2O00292 366 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 EIF3FO00303 357 aaPredicted RBP16.77■□□□□ 0.28
NEK3-206ENST00000611833 LILRB3O75022 631 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 JUNBP17275 347 aaPredicted RBP16.77■□□□□ 0.28
NEK3-206ENST00000611833 LAG3P18627 525 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 TACR1P25103 407 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 PIGAP37287 484 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 GRSF1Q12849 480 aaKnown RBP eCLIP16.77■□□□□ 0.28
NEK3-206ENST00000611833 SKIV2LQ15477 1246 aaKnown RBP16.77■□□□□ 0.28
NEK3-206ENST00000611833 MEP1AQ16819 746 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 GGTA1PQ4G0N0 100 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 C10orf111Q8N326 155 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 LZICQ8WZA0 190 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 HSPBAP1Q96EW2 488 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 CMTM7Q96FZ5 175 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 PYURFQ96I23 114 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 CD84Q9UIB8 345 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 C3orf18Q9UK00 162 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 OGDHLQ9ULD0 1010 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 HS3ST2Q9Y278 367 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 ORC6Q9Y5N6 252 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 U3KQV3 271 aa16.77■□□□□ 0.28
NEK3-206ENST00000611833 RFXANKO14593 260 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 SDC1P18827 310 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 DCTP40126 519 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 HNMTP50135 292 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 PRMT2P55345 433 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 SPIDRQ14159 915 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 C6orf141Q5SZD1 244 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 TMEM179BQ7Z7N9 219 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 PLPP6Q8IY26 295 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 OR10Q1Q8NGQ4 319 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 ASB11Q8WXH4 323 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 APIPQ96GX9 242 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 APOLD1Q96LR9 279 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 CCDC138Q96M89 665 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 MCCC1Q96RQ3 725 aaPredicted RBP16.76■□□□□ 0.27
NEK3-206ENST00000611833 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
NEK3-206ENST00000611833 BLOC1S6Q9UL45 172 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 TMPRSS11EQ9UL52 423 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 PPT2Q9UMR5 302 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 SLC22A14Q9Y267 594 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 MYOFQ9NZM1 2061 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 IGLV3-16A0A075B6K0 115 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 KCNE1BA0A087WTH5 132 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 LOC100130705A0A1B0GUX0 176 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 WNT9AO14904 365 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 B3GALT4O96024 378 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 UGT2B4P06133 528 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 C1SP09871 688 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 CCNA2P20248 432 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 CYP2A7P20853 494 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 ITPKAP23677 461 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 HALP42357 657 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 CDKN2CP42773 168 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 GZMMP51124 257 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 TMBIM6P55061 237 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 ABHD18Q0P651 414 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 CES5AQ6NT32 575 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 NEK5Q6P3R8 708 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 DPY19L3Q6ZPD9 716 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 VRK3Q8IV63 474 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 CHDHQ8NE62 594 aaPredicted RBP16.76■□□□□ 0.27
NEK3-206ENST00000611833 POP5Q969H6 163 aaKnown RBP16.76■□□□□ 0.27
NEK3-206ENST00000611833 ABTB1Q969K4 478 aaPredicted RBP16.76■□□□□ 0.27
NEK3-206ENST00000611833 TESCQ96BS2 214 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 REXO5Q96IC2 774 aaKnown RBP16.76■□□□□ 0.27
NEK3-206ENST00000611833 SLC46A2Q9BY10 475 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 GPRC5BQ9NZH0 403 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 TMED5Q9Y3A6 229 aa16.76■□□□□ 0.27
NEK3-206ENST00000611833 LAMA3Q16787 3333 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 TRAV19A0A0A6YYK7 116 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 NUAK1O60285 661 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 SEC14L2O76054 403 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 TUBA3CQ13748 450 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 ZDHHC20Q5W0Z9 365 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 XAF1Q6GPH4 301 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 ASTLQ6HA08 431 aaPredicted RBP16.75■□□□□ 0.27
NEK3-206ENST00000611833 DOK6Q6PKX4 331 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 HIPK1Q86Z02 1210 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 SLC22A15Q8IZD6 547 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms