RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ERI3O43414 337 aaKnown RBP7.1□□□□□ -1.27
CSDE1-218ENST00000610726 PDE9AO76083 593 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CKMT2P17540 419 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 PRPS1L1P21108 318 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 VARSP26640 1264 aaKnown RBP7.1□□□□□ -1.27
CSDE1-218ENST00000610726 HLA-FP30511 346 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 ARCN1P48444 511 aaKnown RBP7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CCR8P51685 355 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 PTPRRQ15256 657 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 RABL3Q5HYI8 236 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 GCNT6Q5T4J0 391 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 ABRAXAS1Q6UWZ7 409 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 TMIGD1Q6UXZ0 262 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 PARP8Q8N3A8 854 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 MDGA1Q8NFP4 955 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 OR5AK3PQ8NH89 298 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 LINC01599Q8WXQ3 324 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 TRAPPC9Q96Q05 1148 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CHID1Q9BWS9 393 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 POLR1BQ9H9Y6 1135 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 EXD2Q9NVH0 621 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 MAFFQ9ULX9 164 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 A0A1W2PRB8 838 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CXCR6O00574 342 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 KMOO15229 486 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CCNYL3P0C7X3 344 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 EBLN1P0CF75 366 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 C6P13671 934 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 UQCRBP14927 111 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 MYOGP15173 224 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 RYKP34925 604 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 GRIA2P42262 883 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 MAGEA6P43360 314 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 PNLIPRP1P54315 467 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 DNAJB13P59910 316 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CDC42P60953 191 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 RAB8AP61006 207 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 PTGR1Q14914 329 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 C6orf136Q5SQH8 315 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 ZBTB46Q86UZ6 589 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 ADGRG2Q8IZP9 1017 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 KCT2Q8NC54 265 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF540Q8NDQ6 660 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 ACVR1CQ8NER5 493 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 RHEBL1Q8TAI7 183 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 IL17FQ96PD4 163 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CGREF1Q99674 301 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 TRIM8Q9BZR9 551 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 NDEL1Q9GZM8 345 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 TMEM245Q9H330 911 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 POPDC3Q9HBV1 291 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 FZD3Q9NPG1 666 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CTPS2Q9NRF8 586 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 RASSF1Q9NS23 344 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 MAT2BQ9NZL9 334 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CXXC1Q9P0U4 656 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-218ENST00000610726 CCL26Q9Y258 94 aa7.1□□□□□ -1.27
CSDE1-218ENST00000610726 H7BY64 318 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 RFXAPO00287 272 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 MUSKO15146 869 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 MID1O15344 667 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 FDXRP22570 491 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 CPN2P22792 545 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 STXBP1P61764 594 aaKnown RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 RPS13P62277 151 aaKnown RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 ARF5P84085 180 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 GRB7Q14451 532 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 EOGTQ5NDL2 527 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 ERICH5Q6P6B1 374 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 HTR3DQ70Z44 454 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 RNF44Q7L0R7 432 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 CHMP1BQ7LBR1 199 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 SYVN1Q86TM6 617 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 OR9A1PQ8NGU1 263 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 TRMT2BQ96GJ1 504 aaKnown RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 RBM18Q96H35 190 aaKnown RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 ZFRQ96KR1 1074 aaKnown RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 PRAP1Q96NZ9 151 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 LRRC3Q9BY71 257 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 ZCCHC3Q9NUD5 404 aaKnown RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 ZDHHC7Q9NXF8 308 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 PDP1Q9P0J1 537 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 DNMT3BQ9UBC3 853 aaKnown RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 CLIC1O00299 241 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 LATO43561 262 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 SERPINA1P01009 418 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 PGRP06401 933 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 TYRP1P17643 537 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 CLCN4P51793 760 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 LSM3P62310 102 aaKnown RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 SLC9A5Q14940 896 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 TOMM20Q15388 145 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 C18orf21Q32NC0 220 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-218ENST00000610726 SFRP1Q8N474 314 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 TRAM1L1Q8N609 369 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 OR10Q1Q8NGQ4 319 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 FAM110BQ8TC76 370 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 HM13Q8TCT9 377 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 KCNN1Q92952 543 aa7.09□□□□□ -1.27
CSDE1-218ENST00000610726 YIPF4Q9BSR8 244 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms