RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 RAB28P51157 221 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 GDF10P55107 478 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 KCNK10P57789 538 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 SRSF11Q05519 484 aaKnown RBP16.12■□□□□ 0.17
CCDC12-210ENST00000604181 TUBB8Q3ZCM7 444 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 SYTL3Q4VX76 610 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 ZNF324BQ6AW86 544 aaPredicted RBP16.12■□□□□ 0.17
CCDC12-210ENST00000604181 FIGLAQ6QHK4 219 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 TMTC1Q8IUR5 882 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 NACC2Q96BF6 587 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 ZNF285Q96NJ3 590 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 TAAR6Q96RI8 345 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 STOX2Q9P2F5 926 aaPredicted RBP16.12■□□□□ 0.17
CCDC12-210ENST00000604181 SLC2A6Q9UGQ3 507 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 EFR3BQ9Y2G0 817 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
CCDC12-210ENST00000604181 PCDHA13Q9Y5I0 950 aa16.12■□□□□ 0.17
CCDC12-210ENST00000604181 IQCF5A8MTL0 148 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 PRSS44E7EML9 344 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 STK10O94804 968 aaKnown RBP16.11■□□□□ 0.17
CCDC12-210ENST00000604181 TPM1P09493 284 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 CTNNA2P26232 953 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 TDGF1P3P51864 188 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 ARSFP54793 590 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 SEMA3AQ14563 771 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 TLR1Q15399 786 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 RBBP7Q16576 425 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 B3GNTL1Q67FW5 361 aaPredicted RBP16.11■□□□□ 0.17
CCDC12-210ENST00000604181 MCEMP1Q8IX19 187 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 PRSS58Q8IYP2 241 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 SLC22A15Q8IZD6 547 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 FAM71DQ8N9W8 422 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 OR13J1Q8NGT2 312 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 CFAP61Q8NHU2 1237 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 C8orf44Q96CB5 159 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 FERMT1Q9BQL6 677 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 TRIM56Q9BRZ2 755 aaKnown RBP16.11■□□□□ 0.17
CCDC12-210ENST00000604181 DUSP10Q9Y6W6 482 aa16.11■□□□□ 0.17
CCDC12-210ENST00000604181 SETD2Q9BYW2 2564 aaPredicted RBP16.1■□□□□ 0.17
CCDC12-210ENST00000604181 AKR1B15C9JRZ8 316 aaPredicted RBP16.1■□□□□ 0.17
CCDC12-210ENST00000604181 PRICKLE3O43900 615 aaPredicted RBP16.1■□□□□ 0.17
CCDC12-210ENST00000604181 JRKO75564 520 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 CD9P21926 228 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 PSMB5P28074 263 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 PER3P56645 1201 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 MFAP5Q13361 173 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 PARP6Q2NL67 630 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 FRMPD2BQ6IN97 320 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 ISLR2Q6UXK2 745 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 ARHGEF18Q6ZSZ5 1173 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 ZNF534Q76KX8 674 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 TC2NQ8N9U0 490 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 PSMF1Q92530 271 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 ZNF778Q96MU6 729 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 PHF12Q96QT6 1004 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 EPS8L2Q9H6S3 715 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 LRRC40Q9H9A6 602 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 MRM3Q9HC36 420 aaKnown RBP16.1■□□□□ 0.17
CCDC12-210ENST00000604181 ZNF160Q9HCG1 818 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 PLA2G3Q9NZ20 509 aa16.1■□□□□ 0.17
CCDC12-210ENST00000604181 FITM1A5D6W6 292 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 QSOX1O00391 747 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 GPC4O75487 556 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 GOT2P00505 430 aaKnown RBP16.09■□□□□ 0.17
CCDC12-210ENST00000604181 OR56A5P0C7T3 313 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 VSX2P58304 361 aaPredicted RBP16.09■□□□□ 0.17
CCDC12-210ENST00000604181 YBX1P67809 324 aaKnown RBP16.09■□□□□ 0.17
CCDC12-210ENST00000604181 KLC1Q07866 573 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 HSPA14Q0VDF9 509 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 CCSMST1Q4G0I0 132 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 DNAJC21Q5F1R6 531 aaKnown RBP16.09■□□□□ 0.17
CCDC12-210ENST00000604181 FAM180AQ6UWF9 173 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 CNGA4Q8IV77 575 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 KRT222Q8N1A0 295 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 OR52K1Q8NGK4 314 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 OR1N1Q8NGS0 311 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 OR2L8Q8NGY9 312 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 HDAC10Q969S8 669 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 PPP1R2P1Q96PQ5 205 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 SELENOSQ9BQE4 189 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 CRB3Q9BUF7 120 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 LUC7LQ9NQ29 371 aaKnown RBP16.09■□□□□ 0.17
CCDC12-210ENST00000604181 ENAMQ9NRM1 1142 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 SEMA3GQ9NS98 782 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 OLAHQ9NV23 265 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 COPG2Q9UBF2 871 aa16.09■□□□□ 0.17
CCDC12-210ENST00000604181 R3HDM2Q9Y2K5 976 aaKnown RBP16.09■□□□□ 0.17
CCDC12-210ENST00000604181 LOC105369274A0A096LPK9 316 aa16.08■□□□□ 0.16
CCDC12-210ENST00000604181 LOC102723532A0A0G2JNH3 316 aa16.08■□□□□ 0.16
CCDC12-210ENST00000604181 WISP2O76076 250 aa16.08■□□□□ 0.16
CCDC12-210ENST00000604181 S1PR4O95977 384 aa16.08■□□□□ 0.16
CCDC12-210ENST00000604181 F10P00742 488 aa16.08■□□□□ 0.16
CCDC12-210ENST00000604181 CELA2AP08217 269 aa16.08■□□□□ 0.16
CCDC12-210ENST00000604181 PIM1P11309 404 aaPredicted RBP16.08■□□□□ 0.16
CCDC12-210ENST00000604181 GRIA1P42261 906 aa16.08■□□□□ 0.16
CCDC12-210ENST00000604181 PLOD1Q02809 727 aaPredicted RBP16.08■□□□□ 0.16
CCDC12-210ENST00000604181 GRM7Q14831 915 aa16.08■□□□□ 0.16
CCDC12-210ENST00000604181 SF1Q15637 639 aaKnown RBP16.08■□□□□ 0.16
CCDC12-210ENST00000604181 WASHC2DQ5SRD0 308 aa16.08■□□□□ 0.16
CCDC12-210ENST00000604181 IRAK1BP1Q5VVH5 260 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms