RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TXNDC9O14530 226 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 KCNN4O15554 427 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 KCNAB3O43448 404 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 DENRO43583 198 aaKnown RBP4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 TAF5LO75529 589 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 RECQL5O94762 991 aaPredicted RBP4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 APOL3O95236 402 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 NDUFA10O95299 355 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 C8BP07358 591 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 IQCF3P0C7M6 154 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 ADRA2CP18825 462 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 NR4A1P22736 598 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 NMT1P30419 496 aaKnown RBP4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 BTDP43251 543 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC16A1P53985 500 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 KIAA1024LP59773 190 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 YBX1P67809 324 aaKnown RBP4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC13A2Q13183 592 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 SELPLGQ14242 412 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 UGT8Q16880 541 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 HKDC1Q2TB90 917 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 RALGPS1Q5JS13 557 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 CDKL4Q5MAI5 379 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 PLEKHS1Q5SXH7 462 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 RHPN2Q8IUC4 686 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 ADGRF2Q8IZF7 708 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 KREMEN2Q8NCW0 462 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 ICA1LQ8NDH6 482 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 TRPV1Q8NER1 839 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 TRPV3Q8NET8 790 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC20A1Q8WUM9 679 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 PAGE5Q96GU1 130 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 TRNT1Q96Q11 434 aaKnown RBP4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 BBS4Q96RK4 519 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 KRT12Q99456 494 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 ZBTB18Q99592 522 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 PKP2Q99959 881 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF577Q9BSK1 485 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 NKX2-4Q9H2Z4 354 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 Q9H521 79 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 RRAGCQ9HB90 399 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 PCDH9Q9HC56 1237 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 MAN1B1Q9UKM7 699 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 EIF3LQ9Y262 564 aaKnown RBP4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 CPQQ9Y646 472 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNFX1Q9P2E3 1918 aaKnown RBP4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 A0A0D9SFI3 127 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 GSTTP1A0A1W2PQM5 241 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 A0A1W2PRX2 142 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 GLOD5A6NK44 160 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF839A8K0R7 811 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 A8MU76 341 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 F8W036 122 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 H3BSA7 217 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 ADAMDEC1O15204 470 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 BUD23O43709 281 aaKnown RBP4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 CIAO1O76071 339 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 CXCL14O95715 111 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 APOC1P02654 83 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 CTSBP07858 339 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF10P21506 573 aaPredicted RBP4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 CD27P26842 260 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 MAOBP27338 520 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 ADH6P28332 368 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 NAMPTP43490 491 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 SOX10P56693 466 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 SELENOVP59797 346 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 TSPAN5P62079 268 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 PSMC5P62195 406 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 NKX6-1P78426 367 aaPredicted RBP4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 GPLD1P80108 840 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 MZT1Q08AG7 82 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 TROAPQ12815 778 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 NAB1Q13506 487 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 ART3Q13508 389 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 KCNAB1Q14722 419 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 CDK10Q15131 360 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 BRMS1LQ5PSV4 323 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 HEPHL1Q6MZM0 1159 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 PAOXQ6QHF9 649 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 SHC4Q6S5L8 630 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 PRR23BQ6ZRT6 265 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 HDDC2Q7Z4H3 204 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 ECHDC2Q86YB7 292 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 ADGRF4Q8IZF3 695 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 LIX1Q8N485 282 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 BEND7Q8N7W2 519 aaPredicted RBP4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 CLEC1AQ8NC01 280 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 OR5H6Q8NGV6 325 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 LRRC20Q8TCA0 184 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 MCOLN3Q8TDD5 553 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 U2AF1L4Q8WU68 220 aaKnown RBP4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 EDAQ92838 391 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 BCL2L2Q92843 193 aaPredicted RBP4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 SLAMF9Q96A28 289 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 PHF21AQ96BD5 680 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 NACC1Q96RE7 527 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 SH2D3AQ9BRG2 576 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 FUZQ9BT04 418 aa4.9□□□□□ -1.63
SPTBN1-206ENST00000602898 LRRC2Q9BYS8 371 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms