RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 TMA7Q9Y2S6 64 aaKnown RBP11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 DGKBQ9Y6T7 804 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 HS6ST1O60243 411 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 FKBP9O95302 570 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 GPIP06744 558 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PDHA2P29803 388 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 RFC2P35250 354 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMEM220Q6QAJ8 160 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 MACC1Q6ZN28 852 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 FKBP9P1Q75LS8 142 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 CEP295NLQ96MC4 621 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 BDH2Q9BUT1 245 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 ARMC7Q9H6L4 198 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 SLC52A3Q9NQ40 469 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMPRSS11EQ9UL52 423 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 CFAP20Q9Y6A4 193 aaKnown RBP11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 ANKRD33BA6NCL7 494 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 RFXANKO14593 260 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 MAN1A2O60476 641 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 OLFM2O95897 454 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 TIMP1P01033 207 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 ELK4P28324 431 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 CDKN2CP42773 168 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PSMD8P48556 350 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 MNX1P50219 401 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PIGFQ07326 219 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PPP4R4Q6NUP7 873 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZCCHC8Q6NZY4 707 aaKnown RBP11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMPRSS11BQ86T26 416 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 CFAP206Q8IYR0 622 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 C10orf111Q8N326 155 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 GTF2H4Q92759 462 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PANX1Q96RD7 426 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 DPH2Q9BQC3 489 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 CLK4Q9HAZ1 481 aaKnown RBP11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZNF510Q9Y2H8 683 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 PCDHB14Q9Y5E9 798 aa11.23□□□□□ -0.61
ARHGEF1-220ENST00000600274 CHD9Q3L8U1 2897 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 A0A0J9YVX5 310 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ELOVL7A1L3X0 281 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 PTGES3LE9PB15 166 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 J3QRK9 145 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 AGRPO00253 132 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 SERPINA1P01009 418 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 COX7A2P14406 83 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 PTPN2P17706 415 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 EEFSECP57772 596 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 RPL26P61254 145 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ILF2Q12905 390 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 CDKN3Q16667 212 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZXDCQ2QGD7 858 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 FNDC3BQ53EP0 1204 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMTC4Q5T4D3 741 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 SFTPA1Q8IWL2 248 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 TBC1D21Q8IYX1 336 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 STON2Q8WXE9 905 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 BADQ92934 168 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 FBXL8Q96CD0 374 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 C1QTNF3Q9BXJ4 246 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 C11orf49Q9H6J7 331 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 RETREG1Q9H6L5 497 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 CARS2Q9HA77 564 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 OLAHQ9NV23 265 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 DNAJC11Q9NVH1 559 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ARMC1Q9NVT9 282 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 SMPD3Q9NY59 655 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 AASSQ9UDR5 926 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 SNX6Q9UNH7 406 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 DMTF1Q9Y222 760 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 E7EQ34 232 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 hCG_2039718K7EN88 272 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 CXCR6O00574 342 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 DEAF1O75398 565 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 LATS1O95835 1130 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 EFEMP2O95967 443 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 FGBP02675 491 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 EBLN1P0CF75 366 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 CDK4P11802 303 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 BMP2P12643 396 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 RPS3P23396 243 aaKnown RBP eCLIP11.22□□□□□ -0.618e-7■■■■■ 45.6
ARHGEF1-220ENST00000600274 SLC5A2P31639 672 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 CCT8P50990 548 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 NHSL2Q5HYW2 709 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 IER5LQ5T953 404 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 RAET1GQ6H3X3 334 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 GPR180Q86V85 440 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZDHHC13Q8IUH4 622 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 ANKFN1Q8N957 763 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 OSCP1Q8WVF1 389 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 SLC47A1Q96FL8 570 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 PDLIM5Q96HC4 596 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 TPD52L3Q96J77 140 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 TOX2Q96NM4 488 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 MYOCQ99972 504 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 OR2AG1Q9H205 316 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 POLR1BQ9H9Y6 1135 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 HEBP1Q9NRV9 189 aa11.22□□□□□ -0.61
ARHGEF1-220ENST00000600274 MAGEL2Q9UJ55 1249 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms