RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 KIFC1Q9BW19 673 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 NUDT9Q9BW91 350 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 CNOT10Q9H9A5 744 aaKnown RBP13.29□□□□□ -0.28
IRF3-225ENST00000600022 TCAF1Q9Y4C2 921 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 FAM169AQ9Y6X4 670 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 GLYATL1P3A0A0U1RQE8 302 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 TLCD2A6NGC4 264 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 MASP2O00187 686 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 USP1O94782 785 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 VCLP18206 1134 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 SPAM1P38567 509 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 ARL4DP49703 201 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 SERPINB9P50453 376 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 FOXL2P58012 376 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 ACY1Q03154 408 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 CRYMQ14894 314 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 ZNF789Q5FWF6 425 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 JMJD6Q6NYC1 403 aaPredicted RBP13.28□□□□□ -0.28
IRF3-225ENST00000600022 NLRP9Q7RTR0 991 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 SYVN1Q86TM6 617 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 SLC26A11Q86WA9 606 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 ENDOVQ8N8Q3 282 aaKnown RBP13.28□□□□□ -0.28
IRF3-225ENST00000600022 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
IRF3-225ENST00000600022 DDHD1Q8NEL9 900 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 OR4E2Q8NGC2 313 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 OR1L3Q8NH93 324 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 BRSK1Q8TDC3 778 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 THAP4Q8WY91 577 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 PEX13Q92968 403 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 ZNF669Q96BR6 464 aaPredicted RBP13.28□□□□□ -0.28
IRF3-225ENST00000600022 C12orf66Q96MD2 445 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 PAFAH2Q99487 392 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 KLHL25Q9H0H3 589 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 ACSS2Q9NR19 701 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 NSMCE4AQ9NXX6 385 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 TBK1Q9UHD2 729 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 ARL5AQ9Y689 179 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 ESPL1Q14674 2120 aa13.28□□□□□ -0.28
IRF3-225ENST00000600022 HEATR9A2RTY3 570 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 MEN1O00255 615 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 KRT38O76015 456 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 C1QAP02745 245 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 ATXN8OSP0DMR3 200 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 TPH1P17752 444 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 LPOP22079 712 aaPredicted RBP13.27□□□□□ -0.29
IRF3-225ENST00000600022 ADRA1DP25100 572 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 CNTFP26441 200 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 PPP2R2AP63151 447 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 MGAT5Q09328 741 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 POU6F1Q14863 301 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 PTCHD3Q3KNS1 767 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 KBTBD12Q3ZCT8 623 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 LDLRAP1Q5SW96 308 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 ZBTB2Q8N680 514 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 RBMXL3Q8N7X1 1067 aaKnown RBP13.27□□□□□ -0.29
IRF3-225ENST00000600022 PPM1NQ8N819 430 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 ZNF398Q8TD17 642 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 SSC4DQ8WTU2 575 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 TLCD1Q96CP7 247 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 MRRFQ96E11 262 aaKnown RBP13.27□□□□□ -0.29
IRF3-225ENST00000600022 RMDN2Q96LZ7 410 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 TRIM56Q9BRZ2 755 aaKnown RBP13.27□□□□□ -0.29
IRF3-225ENST00000600022 FAM96AQ9H5X1 160 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 TREX1Q9NSU2 369 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 ZFATQ9P243 1243 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 RIMKLBQ9ULI2 386 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 PCDHGA9Q9Y5G4 932 aaKnown RBP13.27□□□□□ -0.29
IRF3-225ENST00000600022 ACTL7BQ9Y614 415 aa13.27□□□□□ -0.29
IRF3-225ENST00000600022 ZCWPW2A0A1B0GU75 182 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 MGAT4DA6NG13 374 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 MROH6A6NGR9 719 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 BTN3A3O00478 584 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 HCRTR1O43613 425 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 KCNJ13O60928 360 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 CPNE3O75131 537 aaKnown RBP13.26□□□□□ -0.29
IRF3-225ENST00000600022 CEACAM4O75871 244 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 ZBTB11O95625 1053 aaPredicted RBP13.26□□□□□ -0.29
IRF3-225ENST00000600022 CTSBP07858 339 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 PVRP15151 417 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 RORAP35398 523 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 HIVEP3Q5T1R4 2406 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 ZNF787Q6DD87 383 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 KLHL35Q6PF15 583 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 ADGRD1Q6QNK2 874 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 GLT6D1Q7Z4J2 308 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 BPHLQ86WA6 291 aaPredicted RBP13.26□□□□□ -0.29
IRF3-225ENST00000600022 KMT5CQ86Y97 462 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 CFAP206Q8IYR0 622 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 DSELQ8IZU8 1212 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 PHC3Q8NDX5 983 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 DTX3LQ8TDB6 740 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 SLC44A1Q8WWI5 657 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 MTBPQ96DY7 904 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 SRPK1Q96SB4 655 aaKnown RBP13.26□□□□□ -0.29
IRF3-225ENST00000600022 SMC6Q96SB8 1091 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 SELENOSQ9BQE4 189 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 TRABDQ9H4I3 376 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 PCMTD2Q9NV79 361 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 SOHLH2Q9NX45 425 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms