RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ABCG8Q9H221 673 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 FAM83DQ9H4H8 585 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 ZBTB20Q9HC78 741 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 CHST11Q9NPF2 352 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 FGF21Q9NSA1 209 aa13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 SCHIP1Q9P0W5 487 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-218ENST00000598907 IGHV5-51A0A0C4DH38 117 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 TCRBV9S1A1TA0A576 114 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 FAM159BA6NKW6 160 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 CCL22O00626 93 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 DNAJC6O75061 913 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 VAPBO95292 243 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 GOT2P00505 430 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 SLC4A1P02730 911 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 STSP08842 583 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 PAMP19021 973 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 SSTR2P30874 369 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 FOXN2P32314 431 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 SPAM1P38567 509 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 ARL4DP49703 201 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 SLC29A2Q14542 456 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 ZNF630Q2M218 657 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 PDPK2PQ6A1A2 396 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 TRMT10BQ6PF06 316 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 FBXO38Q6PIJ6 1188 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 Q6ZS92 163 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 MICALCLQ6ZW33 695 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 CNTN4Q8IWV2 1026 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 AVL9Q8NBF6 648 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 GPR150Q8NGU9 434 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 OR4L1Q8NH43 312 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 TM9SF4Q92544 642 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 ZDHHC12Q96GR4 267 aa13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 ZNF514Q96K75 400 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 NOVA2Q9UNW9 492 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-218ENST00000598907 MDC1Q14676 2089 aaKnown RBP13.46□□□□□ -0.26
SHKBP1-218ENST00000598907 TRBV5-4A0A0C4DH59 114 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 GLYATL1P3A0A0U1RQE8 302 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 MASP2O00187 686 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 SRP72O76094 671 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 ACSL3O95573 720 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 CD1EP15812 388 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 MC4RP32245 332 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 PHBP35232 272 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 PRAMEP78395 509 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 MGAT5Q09328 741 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 MYBPC3Q14896 1274 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 GPR19Q15760 415 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 PLA2G4EQ3MJ16 856 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 AFTPHQ6ULP2 937 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 CAPN12Q6ZSI9 719 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 MRGPRGQ86SM5 289 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 RAB43Q86YS6 212 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 LMNTD2Q8IXW0 634 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 TRAM1L1Q8N609 369 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 SLC38A9Q8NBW4 561 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 FBF1Q8TES7 1133 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 NANOS1Q8WY41 292 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 ANKRD7Q92527 254 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 ACSS3Q9H6R3 686 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 VPS37BQ9H9H4 285 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 SMYD2Q9NRG4 433 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 C20orf96Q9NUD7 363 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 ARGLU1Q9NWB6 273 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 IL1RAPL1Q9NZN1 696 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 SUCOQ9UBS9 1254 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 TMPRSS11EQ9UL52 423 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 ZGRF1Q86YA3 2104 aa13.45□□□□□ -0.26
SHKBP1-218ENST00000598907 PIKFYVEQ9Y2I7 2098 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 A0A087WUV0 522 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 OR51F1A6NGY5 319 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 OR5K4A6NMS3 321 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 PDZK1P1A8MUH7 402 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 KLK3P07288 261 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 NUDT17P0C025 328 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 ERVK-10P10266 1014 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 STX2P32856 288 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 KCNK10P57789 538 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 ACY1Q03154 408 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 CACNG1Q06432 222 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 SEMA3AQ14563 771 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 GPR33Q49SQ1 333 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 TEDDM1Q5T9Z0 273 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 PRAMEF17Q5VTA0 474 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 NEPROQ6NW34 567 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 DUS1LQ6P1R4 473 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 IGFL3Q6UXB1 125 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 FAM151BQ6UXP7 276 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 SNX20Q7Z614 316 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 MRGPREQ86SM8 312 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 GALNT16Q8N428 558 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 CLEC1AQ8NC01 280 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 OR6P1Q8NGX9 317 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 ZNF398Q8TD17 642 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 FAR1Q8WVX9 515 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 UBLCP1Q8WVY7 318 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 CCDC120Q96HB5 630 aa13.44□□□□□ -0.26
SHKBP1-218ENST00000598907 COX14Q96I36 57 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms