RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SDCCAG8Q86SQ7 713 aaPredicted RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 SYVN1Q86TM6 617 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 TMEM151BQ8IW70 566 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 GPR135Q8IZ08 494 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 AGGF1Q8N302 714 aaeCLIP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 DNAJC22Q8N4W6 341 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 ZNF655Q8N720 491 aaPredicted RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 ZNF669Q96BR6 464 aaPredicted RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 EPN3Q9H201 632 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 IRAK4Q9NWZ3 460 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 DHCR7Q9UBM7 475 aaKnown RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 SNX7Q9UNH6 387 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 NEU2Q9Y3R4 380 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 MYO9AB2RTY4 2548 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 TEP1Q99973 2627 aaKnown RBP13.24□□□□□ -0.29
SCAF1-203ENST00000598359 MKRN2OSH3BPM6 223 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 RASGRF2O14827 1237 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 C1orf105O95561 183 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 RPN2P04844 631 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 RHOXF2BP0C7M4 288 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 PSMB5P28074 263 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 TNFRSF8P28908 595 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 GRIA3P42263 894 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 PTGIRP43119 386 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 VSNL1P62760 191 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 SARNPP82979 210 aaKnown RBP13.24□□□□□ -0.29
SCAF1-203ENST00000598359 CYP1B1Q16678 543 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 TYSND1Q2T9J0 566 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 ANKRD20A4Q4UJ75 823 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 ZNF385CQ66K41 422 aaPredicted RBP13.24□□□□□ -0.29
SCAF1-203ENST00000598359 NEPROQ6NW34 567 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 CENPUQ71F23 418 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 LRRC6Q86X45 466 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 OR2L8Q8NGY9 312 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 GSDMBQ8TAX9 411 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 SERPINB12Q96P63 405 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 PANX3Q96QZ0 392 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 RHOXF2Q9BQY4 288 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 NLNQ9BYT8 704 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 SAMD15Q9P1V8 674 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.24□□□□□ -0.29
SCAF1-203ENST00000598359 TCFL5Q9UL49 500 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 SLC39A10Q9ULF5 831 aa13.24□□□□□ -0.29
SCAF1-203ENST00000598359 PCSK5Q92824 1860 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 KDM1AO60341 852 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 NRP2O60462 931 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 PHF2O75151 1096 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 SNRNP200O75643 2136 aaKnown RBP13.23□□□□□ -0.29
SCAF1-203ENST00000598359 RECKO95980 971 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 RAB40ALP0C0E4 278 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 CHRM3P20309 590 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 CCL11P51671 97 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 YBX1P67809 324 aaKnown RBP13.23□□□□□ -0.29
SCAF1-203ENST00000598359 CTBP1Q13363 440 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 DHX34Q14147 1143 aaKnown RBP13.23□□□□□ -0.29
SCAF1-203ENST00000598359 NCF4Q15080 339 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 SF1Q15637 639 aaKnown RBP13.23□□□□□ -0.29
SCAF1-203ENST00000598359 IGFBP7Q16270 282 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 ACSBG2Q5FVE4 666 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 BEND6Q5SZJ8 279 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-203ENST00000598359 MLIPQ5VWP3 458 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 FCRL6Q6DN72 434 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 ZNF470Q6ECI4 717 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 ASB18Q6ZVZ8 466 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 CILP2Q8IUL8 1156 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 DENND6AQ8IWF6 608 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 ADAMTS17Q8TE56 1095 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 DENND1AQ8TEH3 1009 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 SLC30A3Q99726 388 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 FBXO6Q9NRD1 293 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-203ENST00000598359 EURLQ9NYK6 297 aa13.23□□□□□ -0.29
SCAF1-203ENST00000598359 ZCWPW2A0A1B0GU75 182 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 FAM237BA0A1B0GVD1 139 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 SDR42E2A6NKP2 422 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 C9J4A7 227 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 CCDC188H7C350 402 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 ZSCAN9O15535 394 aaPredicted RBP13.22□□□□□ -0.29
SCAF1-203ENST00000598359 CNOT3O75175 753 aaKnown RBP13.22□□□□□ -0.29
SCAF1-203ENST00000598359 S1PR4O95977 384 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 FASTKQ14296 549 aaKnown RBP13.22□□□□□ -0.29
SCAF1-203ENST00000598359 RNF187Q5TA31 235 aaPredicted RBP13.22□□□□□ -0.29
SCAF1-203ENST00000598359 TTC23LQ6PF05 361 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 FIGLAQ6QHK4 219 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 MCATQ8IVS2 390 aaKnown RBP13.22□□□□□ -0.29
SCAF1-203ENST00000598359 APLFQ8IW19 511 aaPredicted RBP13.22□□□□□ -0.29
SCAF1-203ENST00000598359 ZBTB2Q8N680 514 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 NAT8LQ8N9F0 302 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 MCUQ8NE86 351 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 GBP5Q96PP8 586 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 TCF12Q99081 682 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 NAP1L3Q99457 506 aaPredicted RBP13.22□□□□□ -0.29
SCAF1-203ENST00000598359 MIPEPQ99797 713 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 FUT8Q9BYC5 575 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 CHRNA10Q9GZZ6 450 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 ING2Q9H160 280 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 XAB2Q9HCS7 855 aaKnown RBP13.22□□□□□ -0.29
SCAF1-203ENST00000598359 PLCL2Q9UPR0 1127 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 MAD1L1Q9Y6D9 718 aa13.22□□□□□ -0.29
SCAF1-203ENST00000598359 LRRK2Q5S007 2527 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms