RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TTC23LQ6PF05 361 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 AFTPHQ6ULP2 937 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 PEX26Q7Z412 305 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 VRK3Q8IV63 474 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 SLC22A15Q8IZD6 547 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 METTL27Q8N6F8 245 aaPredicted RBP10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 LINC01555Q8NAE3 123 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 OR4L1Q8NH43 312 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 GRHL3Q8TE85 626 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 ASZ1Q8WWH4 475 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 FKBP10Q96AY3 582 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 THOC3Q96J01 351 aaKnown RBP10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 SELENOSQ9BQE4 189 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 CARD6Q9BX69 1037 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 EPS8L2Q9H6S3 715 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 SLC2A6Q9UGQ3 507 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 ANAPC5Q9UJX4 755 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 PACSIN2Q9UNF0 486 aaPredicted RBP10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 OSGIN2Q9Y236 505 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 PRRC2CQ9Y520 2896 aaKnown RBP10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 DOPEY1Q5JWR5 2465 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 TEX15Q9BXT5 2789 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 GRID2IPA4D2P6 1211 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 IQCF5A8MTL0 148 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 BTNL10A8MVZ5 291 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 LRRTM2O43300 516 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 ADRA1DP25100 572 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 PSMA3P25788 255 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 GCGRP47871 477 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 OR1D4P47884 311 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 PER3P56645 1201 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 VSX2P58304 361 aaPredicted RBP10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 ZNF169Q14929 603 aaPredicted RBP10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 FAM214AQ32MH5 1076 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 YOD1Q5VVQ6 348 aaPredicted RBP10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 FCRL6Q6DN72 434 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 KIRREL2Q6UWL6 708 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 LINC00696Q6ZRV3 163 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 COX15Q7KZN9 410 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 KIAA1328Q86T90 577 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 DCUN1D3Q8IWE4 304 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 KRT222Q8N1A0 295 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 ACRBPQ8NEB7 543 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 OR13J1Q8NGT2 312 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 OR2L8Q8NGY9 312 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 GSDMBQ8TAX9 411 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 LKAAEAR1Q8TD35 194 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 COG1Q8WTW3 980 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 SPSB2Q99619 263 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 BARD1Q99728 777 aaKnown RBP10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 LACRTQ9GZZ8 138 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 LHPPQ9H008 270 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 WDR54Q9H977 334 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 ETNK1Q9HBU6 452 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 MRM3Q9HC36 420 aaKnown RBP10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 SEMA3GQ9NS98 782 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 IL1RAPL1Q9NZN1 696 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 NXT1Q9UKK6 140 aaKnown RBP10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 R3HDM2Q9Y2K5 976 aaKnown RBP10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 HS3ST3B1Q9Y662 390 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 MAU2Q9Y6X3 613 aa10.12□□□□□ -0.79
CHMP2A-202ENST00000596708 A0A0J9YVX5 310 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 ERI2A8K979 691 aaKnown RBP10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 E7EVH7 732 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 RASGRF2O14827 1237 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 GPC4O75487 556 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 ONECUT2O95948 504 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 IFNB1P01574 187 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 EDN3P14138 238 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 ITGAXP20702 1163 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 STIP1P31948 543 aaKnown RBP10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 FDFT1P37268 417 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 TSFMP43897 325 aaKnown RBP10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 OCA2Q04671 838 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 GRB7Q14451 532 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 SEMA3AQ14563 771 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 TMED2Q15363 201 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 TLR1Q15399 786 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 WASHC2DQ5SRD0 308 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 PTRHD1Q6GMV3 140 aaKnown RBP10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 IGFL2Q6UWQ7 119 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 ISLR2Q6UXK2 745 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 UNC5DQ6UXZ4 953 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 LDB1Q86U70 411 aaPredicted RBP10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 SRRM1Q8IYB3 904 aaKnown RBP10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 PRSS58Q8IYP2 241 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 SYCE1Q8N0S2 351 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 RAB42Q8N4Z0 105 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 LRRC57Q8N9N7 239 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 SLC35B2Q8TB61 432 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 SKA2Q8WVK7 121 aaPredicted RBP10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 FAR1Q8WVX9 515 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 ZUFSPQ96AP4 578 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 RAD51AP1Q96B01 352 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 ZNF778Q96MU6 729 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 PANX2Q96RD6 677 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 CRB3Q9BUF7 120 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 MENTQ9BUN1 341 aa10.11□□□□□ -0.79
CHMP2A-202ENST00000596708 SLC26A1Q9H2B4 701 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms