RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 FAM155BO75949 473 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 WISP3O95389 354 aaPredicted RBP10.74□□□□□ -0.69
VRK3-210ENST00000596121 SLC16A8O95907 504 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 NTRK1P04629 796 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 ENO3P13929 434 aaPredicted RBP10.74□□□□□ -0.69
VRK3-210ENST00000596121 LIFP15018 202 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 MAGP20916 626 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 F8A1P23610 371 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 GMPRP36959 345 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 GRIA3P42263 894 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 SKIV2L2P42285 1042 aaKnown RBP10.74□□□□□ -0.69
VRK3-210ENST00000596121 ACY1Q03154 408 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 ZNF460Q14592 562 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 EFTUD2Q15029 972 aaKnown RBP eCLIP10.74□□□□□ -0.693e-6■■□□□ 13.2
VRK3-210ENST00000596121 PHKG1Q16816 387 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 DEFB110Q30KQ9 67 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 ARHGAP40Q5TG30 622 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 LCN10Q6JVE6 187 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 TTC23LQ6PF05 361 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 SUSD1Q6UWL2 747 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 MBOAT1Q6ZNC8 495 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 UBE2R2Q712K3 238 aaPredicted RBP10.74□□□□□ -0.69
VRK3-210ENST00000596121 SLC26A11Q86WA9 606 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 PPP1R3BQ86XI6 285 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 FBXO15Q8NCQ5 510 aaPredicted RBP10.74□□□□□ -0.69
VRK3-210ENST00000596121 PPFIBP2Q8ND30 876 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 FBF1Q8TES7 1133 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 ZNF480Q8WV37 535 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 SNRNP27Q8WVK2 155 aaKnown RBP10.74□□□□□ -0.69
VRK3-210ENST00000596121 ANKRD49Q8WVL7 239 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 FOPNLQ96NB1 174 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 RUFY1Q96T51 708 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 SYNPO2LQ9H987 977 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 PDE7BQ9NP56 450 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 WDR70Q9NW82 654 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 TAS2R13Q9NYV9 303 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 NINJ2Q9NZG7 142 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 SPATA7Q9P0W8 599 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 IL17BQ9UHF5 180 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 RARRES3Q9UL19 164 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 PDE10AQ9Y233 779 aa10.74□□□□□ -0.69
VRK3-210ENST00000596121 SEC16AO15027 2179 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 FAM208BQ5VWN6 2430 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 FAM95CA0A1B0GW59 222 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 TMEM150CB9EJG8 249 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 E7ENX8 843 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 K7ENP7 123 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 EIF3FO00303 357 aaPredicted RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 KDM1AO60341 852 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 CTSVO60911 334 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 CATP04040 527 aaKnown RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 MSL3P1P0C860 447 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 SAT1P21673 171 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 IMPA1P29218 277 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 OAS2P29728 719 aaKnown RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 CYP4F2P78329 520 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 TAP2Q03519 686 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 GPS2Q13227 327 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 SF1Q15637 639 aaKnown RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 KBTBD12Q3ZCT8 623 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 MANEAQ5SRI9 462 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 TMTC4Q5T4D3 741 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 FAM45BPQ6NSW5 357 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 UGT3A1Q6NUS8 523 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 FAM199XQ6PEV8 388 aaPredicted RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 INO80CQ6PI98 192 aaPredicted RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 FIGLAQ6QHK4 219 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 PCSK4Q6UW60 755 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 C6orf15Q6UXA7 325 aaPredicted RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 CCDC81Q6ZN84 652 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 NLGN4XQ8N0W4 816 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 NLGN4YQ8NFZ3 816 aaPredicted RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 OR2L3Q8NG85 312 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 GABPB2Q8TAK5 448 aaPredicted RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 FAM45AQ8TCE6 357 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 IFT81Q8WYA0 676 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 TCTN2Q96GX1 697 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 VPS39Q96JC1 886 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 MIPEPQ99797 713 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 ACAT2Q9BWD1 397 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 SLC12A9Q9BXP2 914 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 CHRNA10Q9GZZ6 450 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 RHOJQ9H4E5 214 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 CAB39LQ9H9S4 337 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 FAM114A2Q9NRY5 505 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 LNPEPQ9UIQ6 1025 aa10.73□□□□□ -0.69
VRK3-210ENST00000596121 CORO1CQ9ULV4 474 aaPredicted RBP10.73□□□□□ -0.69
VRK3-210ENST00000596121 IGKV1-8A0A0C4DH67 115 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 CDC7O00311 574 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 ZBTB14O43829 449 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 SCRG1O75711 98 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 SYF2O95926 243 aaKnown RBP10.72□□□□□ -0.69
VRK3-210ENST00000596121 GSTA2P09210 222 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 MAP4P27816 1152 aaKnown RBP10.72□□□□□ -0.69
VRK3-210ENST00000596121 STAT5AP42229 794 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 ATP1A2P50993 1020 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 PNLIPRP1P54315 467 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 TMPRSS3P57727 454 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 IL2P60568 153 aa10.72□□□□□ -0.69
VRK3-210ENST00000596121 VAC14Q08AM6 782 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms