RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 UGDHO60701 494 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 EML2O95834 649 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 MTHFD1P11586 935 aaKnown RBP20.16■□□□□ 0.82
PNKP-203ENST00000593946 HMOX2P30519 316 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 HSD17B2P37059 387 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 CYP2A13Q16696 494 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 SLC30A9Q6PML9 568 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 RNF165Q6ZSG1 346 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 PARGQ86W56 976 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 HOMEZQ8IX15 550 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 GPBAR1Q8TDU6 330 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 IL17FQ96PD4 163 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 CCDC106Q9BWC9 280 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 DUSP15Q9H1R2 295 aaPredicted RBP20.16■□□□□ 0.82
PNKP-203ENST00000593946 TCEAL2Q9H3H9 227 aaPredicted RBP20.16■□□□□ 0.82
PNKP-203ENST00000593946 SPATA7Q9P0W8 599 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 POLG2Q9UHN1 485 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 SLC12A4Q9UP95 1085 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 HEBP2Q9Y5Z4 205 aa20.16■□□□□ 0.82
PNKP-203ENST00000593946 TNRC6BQ9UPQ9 1833 aaKnown RBP20.15■□□□□ 0.82
PNKP-203ENST00000593946 KCNE1BA0A087WTH5 132 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 ATP6AP2A0A1C7CYW4 349 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 ATP6AP2O75787 350 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 WFS1O76024 890 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 LINC00032P0C843 101 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 NCF2P19878 526 aaPredicted RBP20.15■□□□□ 0.82
PNKP-203ENST00000593946 HALP42357 657 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 HTR6P50406 440 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 ILF3Q12906 894 aaKnown RBP eCLIP20.15■□□□□ 0.82
PNKP-203ENST00000593946 UBAP2LQ14157 1087 aaKnown RBP20.15■□□□□ 0.82
PNKP-203ENST00000593946 FASTKQ14296 549 aaKnown RBP20.15■□□□□ 0.82
PNKP-203ENST00000593946 TCEA2Q15560 299 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 TMEFF1Q8IYR6 380 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 CAMK1GQ96NX5 476 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 ZMYND15Q9H091 742 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 TM9SF3Q9HD45 589 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 PFDN4Q9NQP4 134 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 CCDC177Q9NQR7 707 aaPredicted RBP20.15■□□□□ 0.82
PNKP-203ENST00000593946 GPRC5BQ9NZH0 403 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 LNPEPQ9UIQ6 1025 aa20.15■□□□□ 0.82
PNKP-203ENST00000593946 CCND1P24385 295 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 CHIT1Q13231 466 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 KRT72Q14CN4 511 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 TJAP1Q5JTD0 557 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 TMEM198Q66K66 360 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 LAYNQ6UX15 382 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 CHSY3Q70JA7 882 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 TREML1Q86YW5 311 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 LMNTD1Q8N9Z9 388 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 DNASE2BQ8WZ79 361 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 MAGEB10Q96LZ2 347 aaPredicted RBP20.14■□□□□ 0.81
PNKP-203ENST00000593946 ZNF385DQ9H6B1 395 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 CAAP1Q9H8G2 361 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 AKTIPQ9H8T0 292 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 SDK1Q7Z5N4 2213 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 HEATR5BQ9P2D3 2071 aa20.14■□□□□ 0.81
PNKP-203ENST00000593946 E7EQ34 232 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 VPS4BO75351 444 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 F3P13726 295 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 NPPBP16860 134 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 FNTBP49356 437 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 BLKP51451 505 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 E2F2Q14209 437 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 TBCCQ15814 346 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 ZNF542PQ5EBM4 170 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 LIPJQ5W064 366 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 SUSD1Q6UWL2 747 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 WDR5BQ86VZ2 330 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 MYLK4Q86YV6 388 aaPredicted RBP20.13■□□□□ 0.81
PNKP-203ENST00000593946 PHACTR4Q8IZ21 702 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 MIPEPQ99797 713 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 MIR1-1HGQ9H1L0 117 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 KCNE2Q9Y6J6 123 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 ZNF839A8K0R7 811 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 TLR4O00206 839 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 FFAR3O14843 346 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 GPR42O15529 346 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 PRR35P0CG20 571 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 T-ENOLP0DO92 83 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 GNAZP19086 355 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 IRF8Q02556 426 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 ABRAXAS2Q15018 415 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 IL27RAQ6UWB1 636 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 SCIMPQ6UWF3 145 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 CPSF7Q8N684 471 aaKnown RBP20.13■□□□□ 0.81
PNKP-203ENST00000593946 OR2T11Q8NH01 316 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 SETD7Q8WTS6 366 aaKnown RBP20.13■□□□□ 0.81
PNKP-203ENST00000593946 USP7Q93009 1102 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 NEIL2Q969S2 332 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 CATSPER2Q96P56 530 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 NRTNQ99748 197 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 GSDMCQ9BYG8 508 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 ARL8BQ9NVJ2 186 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 A0A0C4DFX4 3053 aa20.13■□□□□ 0.81
PNKP-203ENST00000593946 SNRNP200O75643 2136 aaKnown RBP20.13■□□□□ 0.81
PNKP-203ENST00000593946 TMEM221A6NGB7 291 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 PRR5-ARHGAP8B1AHC4 643 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 M0R296 226 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 MANBAO00462 879 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms