RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 PRAMEF13Q5VWM6 474 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 NLRP9Q7RTR0 991 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 OVCH1Q7RTY7 1134 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 VRK3Q8IV63 474 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 TTC29Q8NA56 475 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-203ENST00000593641 GSDMBQ8TAX9 411 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 UBE2Q2Q8WVN8 375 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 ATG4AQ8WYN0 398 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 MRFAP1L1Q96HT8 127 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 IL17FQ96PD4 163 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 WDR77Q9BQA1 342 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-203ENST00000593641 MENTQ9BUN1 341 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 CARD6Q9BX69 1037 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 RAB11FIP5Q9BXF6 653 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 MRM3Q9HC36 420 aaKnown RBP21.74■■□□□ 1.07
SSBP4-203ENST00000593641 ZBTB20Q9HC78 741 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-203ENST00000593641 SLC6A20Q9NP91 592 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 CUTCQ9NTM9 273 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 CIDEBQ9UHD4 219 aa21.74■■□□□ 1.07
SSBP4-203ENST00000593641 CRYBG3Q68DQ2 2970 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 WIPF3A6NGB9 483 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 DSCR3O14972 297 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 GCGRP47871 477 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 ZNF75DP51815 510 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 ACVR1Q04771 509 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 TTC23LQ6PF05 361 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 ZNF534Q76KX8 674 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 CUZD1Q86UP6 607 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 TMEM151BQ8IW70 566 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 OR2L8Q8NGY9 312 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 LKAAEAR1Q8TD35 194 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 PPP4R1Q8TF05 950 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 PEX13Q92968 403 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 VPS50Q96JG6 964 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 SELENOSQ9BQE4 189 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 NXT1Q9UKK6 140 aaKnown RBP21.73■■□□□ 1.07
SSBP4-203ENST00000593641 TCAF1Q9Y4C2 921 aa21.73■■□□□ 1.07
SSBP4-203ENST00000593641 IQCF5A8MTL0 148 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 RASGRF2O14827 1237 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 ITGAXP20702 1163 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 SEMA3AQ14563 771 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 NKG7Q16617 165 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 AGAP7PQ5VUJ5 663 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 FIGLAQ6QHK4 219 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 RAB42Q8N4Z0 105 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 PPHLN1Q8NEY8 458 aaKnown RBP21.72■■□□□ 1.07
SSBP4-203ENST00000593641 COG1Q8WTW3 980 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 ZNF778Q96MU6 729 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 AGAP4Q96P64 663 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 SPSB2Q99619 263 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 SLC26A1Q9H2B4 701 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 CATSPERZQ9NTU4 200 aa21.72■■□□□ 1.07
SSBP4-203ENST00000593641 SOCS6O14544 535 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 PRMT5O14744 637 aaPredicted RBP21.71■■□□□ 1.07
SSBP4-203ENST00000593641 ALOX12BO75342 701 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 FKBP9O95302 570 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 CLDN1O95832 211 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 ONECUT2O95948 504 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 MCM3P25205 808 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 GRIA1P42261 906 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 GRIA3P42263 894 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 TTPAP49638 278 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 GRB7Q14451 532 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 RBBP7Q16576 425 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 HIF1AQ16665 826 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 CRB2Q5IJ48 1285 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 SEL1L2Q5TEA6 688 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 FCRL6Q6DN72 434 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 PTRHD1Q6GMV3 140 aaKnown RBP21.71■■□□□ 1.07
SSBP4-203ENST00000593641 KRT222Q8N1A0 295 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 LMNTD1Q8N9Z9 388 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 HES6Q96HZ4 224 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 PANX3Q96QZ0 392 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 BARD1Q99728 777 aaKnown RBP21.71■■□□□ 1.07
SSBP4-203ENST00000593641 BAG1Q99933 345 aaPredicted RBP21.71■■□□□ 1.07
SSBP4-203ENST00000593641 FRMD8P1Q9BZ68 369 aaPredicted RBP21.71■■□□□ 1.07
SSBP4-203ENST00000593641 SOX17Q9H6I2 414 aaPredicted RBP21.71■■□□□ 1.07
SSBP4-203ENST00000593641 RAB6BQ9NRW1 208 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 IL1RAPL1Q9NZN1 696 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 NOVA2Q9UNW9 492 aaKnown RBP21.71■■□□□ 1.07
SSBP4-203ENST00000593641 ZNF148Q9UQR1 794 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 NTNG1Q9Y2I2 539 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 MRFAP1Q9Y605 127 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 HS3ST3B1Q9Y662 390 aa21.71■■□□□ 1.07
SSBP4-203ENST00000593641 LIASO43766 372 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 SLCO2B1O94956 709 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 COL8A1P27658 744 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 AOAHP28039 575 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 OASLQ15646 514 aaKnown RBP21.7■■□□□ 1.06
SSBP4-203ENST00000593641 FAM214AQ32MH5 1076 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 TUBB8Q3ZCM7 444 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 ZNF787Q6DD87 383 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 SHISA6Q6ZSJ9 500 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 COX15Q7KZN9 410 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 METTL27Q8N6F8 245 aaPredicted RBP21.7■■□□□ 1.06
SSBP4-203ENST00000593641 ST6GALNAC3Q8NDV1 305 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 SKA2Q8WVK7 121 aaPredicted RBP21.7■■□□□ 1.06
SSBP4-203ENST00000593641 ZUFSPQ96AP4 578 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 RAD51AP1Q96B01 352 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 EPS8L2Q9H6S3 715 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 349.7 ms