RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PCM1Q15154 2024 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 TMED2Q15363 201 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 ZC3H12BQ5HYM0 836 aaKnown RBP22.95■■□□□ 1.26
LSM4-202ENST00000593564 FCRL6Q6DN72 434 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 LMNTD1Q8N9Z9 388 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 BARD1Q99728 777 aaKnown RBP22.95■■□□□ 1.26
LSM4-202ENST00000593564 RAB11FIP5Q9BXF6 653 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 SLC26A1Q9H2B4 701 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 ZBTB20Q9HC78 741 aaPredicted RBP22.95■■□□□ 1.26
LSM4-202ENST00000593564 RAB6BQ9NRW1 208 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 CIDEBQ9UHD4 219 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 ERRFI1Q9UJM3 462 aaPredicted RBP22.95■■□□□ 1.26
LSM4-202ENST00000593564 FBXL4Q9UKA2 621 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 PCDHGA10Q9Y5H3 936 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 CAPN6Q9Y6Q1 641 aa22.95■■□□□ 1.26
LSM4-202ENST00000593564 PRMT5O14744 637 aaPredicted RBP22.94■■□□□ 1.26
LSM4-202ENST00000593564 DSCR3O14972 297 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 FKBP9O95302 570 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 GRM7Q14831 915 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 TCTE1Q5JU00 501 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 FIGLAQ6QHK4 219 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 COX15Q7KZN9 410 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 TAX1BP1Q86VP1 789 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 PPHLN1Q8NEY8 458 aaKnown RBP22.94■■□□□ 1.26
LSM4-202ENST00000593564 ZNF285Q96NJ3 590 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 SPSB2Q99619 263 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 DESI2Q9BSY9 194 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 SLC6A20Q9NP91 592 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 CUTCQ9NTM9 273 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 ANAPC5Q9UJX4 755 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 SLC39A10Q9ULF5 831 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 ZNF148Q9UQR1 794 aa22.94■■□□□ 1.26
LSM4-202ENST00000593564 COPG1Q9Y678 874 aaKnown RBP22.94■■□□□ 1.26
LSM4-202ENST00000593564 LDLRP01130 860 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 ITGA3P26006 1051 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 TTPAP49638 278 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 SF1Q15637 639 aaKnown RBP22.93■■□□□ 1.26
LSM4-202ENST00000593564 NKG7Q16617 165 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 SEL1L2Q5TEA6 688 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 PRAMEF13Q5VWM6 474 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 CUZD1Q86UP6 607 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 KRT222Q8N1A0 295 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 SELENOSQ9BQE4 189 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 RBSNQ9H1K0 784 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 MRM3Q9HC36 420 aaKnown RBP22.93■■□□□ 1.26
LSM4-202ENST00000593564 CATSPERZQ9NTU4 200 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 MARCH4Q9P2E8 410 aaPredicted RBP22.93■■□□□ 1.26
LSM4-202ENST00000593564 CDC23Q9UJX2 597 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 CENPEQ02224 2701 aa22.93■■□□□ 1.26
LSM4-202ENST00000593564 POLEQ07864 2286 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 ANKUB1A6NFN9 424 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 SOCS6O14544 535 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 PRICKLE3O43900 615 aaPredicted RBP22.92■■□□□ 1.26
LSM4-202ENST00000593564 APRTP07741 180 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 ETS1P14921 441 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 MCM3P25205 808 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 GRIA3P42263 894 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 TTC23LQ6PF05 361 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 MAMDC2Q7Z304 686 aaPredicted RBP22.92■■□□□ 1.26
LSM4-202ENST00000593564 PRUNE1Q86TP1 453 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 LDB1Q86U70 411 aaPredicted RBP22.92■■□□□ 1.26
LSM4-202ENST00000593564 SLC13A5Q86YT5 568 aaPredicted RBP22.92■■□□□ 1.26
LSM4-202ENST00000593564 RNF10Q8N5U6 811 aaKnown RBP22.92■■□□□ 1.26
LSM4-202ENST00000593564 TTC29Q8NA56 475 aaPredicted RBP22.92■■□□□ 1.26
LSM4-202ENST00000593564 C1orf54Q8WWF1 131 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 ZUFSPQ96AP4 578 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 PANX3Q96QZ0 392 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 WDR77Q9BQA1 342 aaPredicted RBP22.92■■□□□ 1.26
LSM4-202ENST00000593564 PAK5Q9P286 719 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 NXT1Q9UKK6 140 aaKnown RBP22.92■■□□□ 1.26
LSM4-202ENST00000593564 SLC5A6Q9Y289 635 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 HS3ST3B1Q9Y662 390 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 MYO9AB2RTY4 2548 aa22.92■■□□□ 1.26
LSM4-202ENST00000593564 ITPR2Q14571 2701 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 FITM1A5D6W6 292 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 TARM1B6A8C7 271 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 CD3EAPO15446 510 aaKnown RBP22.91■■□□□ 1.26
LSM4-202ENST00000593564 GLRBP48167 497 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 PCID2Q5JVF3 399 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 PTRHD1Q6GMV3 140 aaKnown RBP22.91■■□□□ 1.26
LSM4-202ENST00000593564 IGFL2Q6UWQ7 119 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 CCDC89Q8N998 374 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 GSDMBQ8TAX9 411 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 PPP4R1Q8TF05 950 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.91■■□□□ 1.26
LSM4-202ENST00000593564 RAD51AP1Q96B01 352 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 P2RY12Q9H244 342 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 CHRAC1Q9NRG0 131 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 IL1RAPL1Q9NZN1 696 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 GNPTGQ9UJJ9 305 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 NTNG1Q9Y2I2 539 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 KLK4Q9Y5K2 254 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 MRFAP1Q9Y605 127 aa22.91■■□□□ 1.26
LSM4-202ENST00000593564 FAM214AQ32MH5 1076 aa22.9■■□□□ 1.26
LSM4-202ENST00000593564 KIRREL2Q6UWL6 708 aa22.9■■□□□ 1.26
LSM4-202ENST00000593564 LRRC6Q86X45 466 aa22.9■■□□□ 1.26
LSM4-202ENST00000593564 MPP5Q8N3R9 675 aa22.9■■□□□ 1.26
LSM4-202ENST00000593564 HMGCLL1Q8TB92 370 aa22.9■■□□□ 1.26
LSM4-202ENST00000593564 UBE2Q2Q8WVN8 375 aa22.9■■□□□ 1.26
LSM4-202ENST00000593564 C5orf34Q96MH7 638 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms