RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 GRB7Q14451 532 aa17.22■□□□□ 0.35
CIRBP-243ENST00000593128 CCNG2Q16589 344 aa17.22■□□□□ 0.35
CIRBP-243ENST00000593128 CCSMST1Q4G0I0 132 aa17.22■□□□□ 0.35
CIRBP-243ENST00000593128 ZC3H12BQ5HYM0 836 aaKnown RBP17.22■□□□□ 0.35
CIRBP-243ENST00000593128 HIST2H2BCQ6DN03 193 aa17.22■□□□□ 0.35
CIRBP-243ENST00000593128 HPS6Q86YV9 775 aa17.22■□□□□ 0.35
CIRBP-243ENST00000593128 TTC29Q8NA56 475 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-243ENST00000593128 PRR7Q8TB68 274 aa17.22■□□□□ 0.35
CIRBP-243ENST00000593128 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-243ENST00000593128 C19orf60Q96EN9 201 aa17.22■□□□□ 0.35
CIRBP-243ENST00000593128 MIPEPQ99797 713 aa17.22■□□□□ 0.35
CIRBP-243ENST00000593128 SELENOSQ9BQE4 189 aa17.22■□□□□ 0.35
CIRBP-243ENST00000593128 SEC16AO15027 2179 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 A0A1B0GX78 115 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 TCP11X1B4DZS4 312 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 SLCO2B1O94956 709 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 VAPBO95292 243 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 IGHEP01854 428 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 FGGP02679 453 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 UMODP07911 640 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 VPS41P49754 854 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 ARSFP54793 590 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 VSX2P58304 361 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 TSTA3Q13630 321 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 TRIP13Q15645 432 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 EIF2S3LQ2VIR3 472 aaKnown RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 PLEKHN1Q494U1 663 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 FCRL6Q6DN72 434 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 MRPL14Q6P1L8 145 aaKnown RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 CISD2Q8N5K1 135 aaKnown RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 PEX13Q92968 403 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 RAD51AP1Q96B01 352 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 FOPNLQ96NB1 174 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 PSMG3-AS1Q96PY0 264 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 MENTQ9BUN1 341 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 RAB11FIP5Q9BXF6 653 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 IL22Q9GZX6 179 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 SOX17Q9H6I2 414 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 EIF2B3Q9NR50 452 aaKnown RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 CUTCQ9NTM9 273 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 SYBUQ9NX95 663 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 MAU2Q9Y6X3 613 aa17.21■□□□□ 0.35
CIRBP-243ENST00000593128 UTP20O75691 2785 aaKnown RBP17.21■□□□□ 0.35
CIRBP-243ENST00000593128 SHANK1Q9Y566 2161 aa17.21■□□□□ 0.34
CIRBP-243ENST00000593128 MAST4O15021 2626 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 CEP104O60308 925 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 SEMA7AO75326 666 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 C1orf105O95561 183 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 EIF2S1P05198 315 aaKnown RBP17.2■□□□□ 0.34
CIRBP-243ENST00000593128 PIM1P11309 404 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-243ENST00000593128 OR1D4P47884 311 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 NPY2RP49146 381 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 GRM7Q14831 915 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 MYBPC3Q14896 1274 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 SIX1Q15475 284 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-243ENST00000593128 C4orf17Q53FE4 359 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 SDCCAG8Q86SQ7 713 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-243ENST00000593128 IQCKQ8N0W5 287 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 DENND1AQ8TEH3 1009 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 MFSD3Q96ES6 412 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 P2RY12Q9H244 342 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 ATP13A2Q9NQ11 1180 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 SLC22A11Q9NSA0 550 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 TREX1Q9NSU2 369 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 C5AR2Q9P296 337 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 FBXL4Q9UKA2 621 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 B3GNT3Q9Y2A9 372 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 NUP210LQ5VU65 1888 aa17.2■□□□□ 0.34
CIRBP-243ENST00000593128 A1L4Q6 167 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 DSCR3O14972 297 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 KPNA5O15131 536 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 NIPSNAP2O75323 286 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 CXCR5P32302 372 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 GLRBP48167 497 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 NR6A1Q15406 480 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 TCTE1Q5JU00 501 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 CTSL3PQ5NE16 218 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 MRNIPQ6NTE8 343 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 CASC4Q6P4E1 433 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 C4orf22Q6V702 233 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 LRRC6Q86X45 466 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 PRSS58Q8IYP2 241 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 ZADH2Q8N4Q0 377 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 DTWD1Q8N5C7 304 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 SSC4DQ8WTU2 575 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 TM9SF4Q92544 642 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 SNRNP40Q96DI7 357 aaKnown RBP17.19■□□□□ 0.34
CIRBP-243ENST00000593128 CTSFQ9UBX1 484 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 DRG1Q9Y295 367 aaKnown RBP17.19■□□□□ 0.34
CIRBP-243ENST00000593128 CRYL1Q9Y2S2 319 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 FAM169AQ9Y6X4 670 aa17.19■□□□□ 0.34
CIRBP-243ENST00000593128 LRRK2Q5S007 2527 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 A0A0J9YVX5 310 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 TCRBV7S3A2A0A539 114 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 AGPSO00116 658 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 AP3B1O00203 1094 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 NRP2O60462 931 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 CHRM3P20309 590 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 ITGAXP20702 1163 aa17.18■□□□□ 0.34
CIRBP-243ENST00000593128 RBBP7Q16576 425 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms