RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PRDX3P30048 256 aaKnown RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 RORAP35398 523 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 ATP5OP48047 213 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 PRLHRP49683 370 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 RPA4Q13156 261 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 LAMB3Q13751 1172 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 SSPNQ14714 243 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 NCF4Q15080 339 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 NOMO1Q15155 1222 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 CCNG2Q16589 344 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 KYNUQ16719 465 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 GPR33Q49SQ1 333 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 SLC6A19Q695T7 634 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 C8orf74Q6P047 294 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 CERS6Q6ZMG9 384 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 SNX20Q7Z614 316 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 AMIGO1Q86WK6 493 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 SLC13A5Q86YT5 568 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 MMGT1Q8N4V1 131 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 CCDC89Q8N998 374 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 SLC38A9Q8NBW4 561 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 DENND1AQ8TEH3 1009 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 ALG3Q92685 438 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 TCTN2Q96GX1 697 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 OXNAD1Q96HP4 312 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 VPS50Q96JG6 964 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 QKIQ96PU8 341 aaKnown RBP eCLIP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 RUFY1Q96T51 708 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 SMAD5Q99717 465 aaKnown RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 RSRP1Q9BUV0 290 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 HEMGNQ9BXL5 484 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 ILKAPQ9H0C8 392 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 GBA3Q9H227 469 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 PCMTD2Q9NV79 361 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 NDOR1Q9UHB4 597 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 SOX13Q9UN79 622 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 PACSIN2Q9UNF0 486 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-226ENST00000591534 B3GNT3Q9Y2A9 372 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 ARL5AQ9Y689 179 aa9.13□□□□□ -0.95
BRCA1-226ENST00000591534 TEX15Q9BXT5 2789 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 TCP11X1B4DZS4 312 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 APOC4-APOC2K7ER74 178 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 DYNC1I1O14576 645 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 GPR39O43194 453 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 AGTP01019 485 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 APOC2P02655 101 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 FOLR3P41439 243 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 ARCN1P48444 511 aaKnown RBP9.12□□□□□ -0.95
BRCA1-226ENST00000591534 PLOD1Q02809 727 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-226ENST00000591534 CAV1Q03135 178 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 CUL1Q13616 776 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 EIF2S3LQ2VIR3 472 aaKnown RBP9.12□□□□□ -0.95
BRCA1-226ENST00000591534 ZRANB3Q5FWF4 1079 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 IRAK1BP1Q5VVH5 260 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 DUS1LQ6P1R4 473 aaKnown RBP9.12□□□□□ -0.95
BRCA1-226ENST00000591534 MAMDC2Q7Z304 686 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-226ENST00000591534 PCGF5Q86SE9 256 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 CDKL3Q8IVW4 592 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-226ENST00000591534 IFT20Q8IY31 132 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 NXPE1Q8N323 547 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 ZADH2Q8N4Q0 377 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 ZBTB2Q8N680 514 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 GOLGA6L1Q8N7Z2 621 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 OR1L3Q8NH93 324 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 PROKR1Q8TCW9 393 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 COG1Q8WTW3 980 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 SLCO2A1Q92959 643 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 NACC2Q96BF6 587 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 CAPZA3Q96KX2 299 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 RMDN2Q96LZ7 410 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 C5orf34Q96MH7 638 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 GORASP1Q9BQQ3 440 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 FICDQ9BVA6 458 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 NUDT9Q9BW91 350 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 CARD6Q9BX69 1037 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 AP1M1Q9BXS5 423 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 PITPNM3Q9BZ71 974 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 AGPAT4Q9NRZ5 378 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 TXLNGQ9NUQ3 528 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 POLG2Q9UHN1 485 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 SRPK3Q9UPE1 567 aa9.12□□□□□ -0.95
BRCA1-226ENST00000591534 DRG1Q9Y295 367 aaKnown RBP9.12□□□□□ -0.95
BRCA1-226ENST00000591534 AGAP14A8MT82 685 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 AP3B1O00203 1094 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 GAPDHSO14556 408 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 CTIFO43310 598 aaKnown RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 ZNF749O43361 778 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 PHF2O75151 1096 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 SEMA7AO75326 666 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 OR2B3O76000 313 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 AP2A2O94973 939 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 ALBP02768 609 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 PIM1P11309 404 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 EPHA1P21709 976 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 OTX2P32243 289 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 SHMT2P34897 504 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 DCDP81605 110 aaKnown RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 SRSF11Q05519 484 aaKnown RBP9.11□□□□□ -0.95
BRCA1-226ENST00000591534 PCDH1Q08174 1060 aa9.11□□□□□ -0.95
BRCA1-226ENST00000591534 ABRQ12979 859 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms