RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 NR4A3Q92570 626 aa15.23■□□□□ 0.03
DDX39A-216ENST00000591275 CCDC42Q96M95 316 aa15.23■□□□□ 0.03
DDX39A-216ENST00000591275 TRIM56Q9BRZ2 755 aaKnown RBP15.23■□□□□ 0.03
DDX39A-216ENST00000591275 CRB3Q9BUF7 120 aa15.23■□□□□ 0.03
DDX39A-216ENST00000591275 TSPY26PQ9H489 355 aa15.23■□□□□ 0.03
DDX39A-216ENST00000591275 NHEJ1Q9H9Q4 299 aaPredicted RBP15.23■□□□□ 0.03
DDX39A-216ENST00000591275 NLE1Q9NVX2 485 aaPredicted RBP15.23■□□□□ 0.03
DDX39A-216ENST00000591275 ZNHIT6Q9NWK9 470 aaKnown RBP15.23■□□□□ 0.03
DDX39A-216ENST00000591275 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.23■□□□□ 0.03
DDX39A-216ENST00000591275 PTGFRNQ9P2B2 879 aa15.23■□□□□ 0.03
DDX39A-216ENST00000591275 IMPACTQ9P2X3 320 aa15.23■□□□□ 0.03
DDX39A-216ENST00000591275 SUCOQ9UBS9 1254 aaKnown RBP15.23■□□□□ 0.03
DDX39A-216ENST00000591275 SH3BGRL2Q9UJC5 107 aa15.23■□□□□ 0.03
DDX39A-216ENST00000591275 NXT1Q9UKK6 140 aaKnown RBP15.23■□□□□ 0.03
DDX39A-216ENST00000591275 SLC5A10A0PJK1 596 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 SYCE3A1L190 88 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 DYTNA2CJ06 578 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 OR51F1A6NGY5 319 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 VSTM2BA6NLU5 285 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 H7C0S8 307 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 CCL21O00585 134 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 KCNN4O15554 427 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 HPP00738 406 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 COX6B1P14854 86 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 ACPPP15309 386 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 PTGER4P35408 488 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 NSG1P42857 185 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 KLC1Q07866 573 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 GRM7Q14831 915 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 BNC2Q6ZN30 1099 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-216ENST00000591275 TMTC1Q8IUR5 882 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 SIRT6Q8N6T7 355 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 TTC29Q8NA56 475 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-216ENST00000591275 ACTL9Q8TC94 416 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 CDKN2AIPNLQ96HQ2 116 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 VPS50Q96JG6 964 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 IL17FQ96PD4 163 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 C19orf43Q9BQ61 176 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 SELENOSQ9BQE4 189 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 FERMT1Q9BQL6 677 aa15.22■□□□□ 0.03
DDX39A-216ENST00000591275 PIH1D1Q9NWS0 290 aaKnown RBP15.22■□□□□ 0.03
DDX39A-216ENST00000591275 GOLGA6L19H0YKK7 550 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 MAP2K7O14733 419 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 KDM1AO60341 852 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 STK10O94804 968 aaKnown RBP15.21■□□□□ 0.03
DDX39A-216ENST00000591275 UNC5CO95185 931 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 MED26O95402 600 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 TNFSF10P50591 281 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 RAB28P51157 221 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 POU6F1Q14863 301 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 TCTE1Q5JU00 501 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 FIGLAQ6QHK4 219 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 TMEM207Q6UWW9 146 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 ARHGEF18Q6ZSZ5 1173 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 NLRP9Q7RTR0 991 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 CDKL3Q8IVW4 592 aaPredicted RBP15.21■□□□□ 0.03
DDX39A-216ENST00000591275 KBTBD2Q8IY47 623 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 ZNF808Q8N4W9 903 aaPredicted RBP15.21■□□□□ 0.03
DDX39A-216ENST00000591275 CFAP61Q8NHU2 1237 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 BRIX1Q8TDN6 353 aaKnown RBP15.21■□□□□ 0.03
DDX39A-216ENST00000591275 ANP32BQ92688 251 aaKnown RBP15.21■□□□□ 0.03
DDX39A-216ENST00000591275 KRT35Q92764 455 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 SPATA13Q96N96 652 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 ARNT2Q9HBZ2 717 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 CHST11Q9NPF2 352 aa15.21■□□□□ 0.03
DDX39A-216ENST00000591275 TRAV17A0A0B4J275 112 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 QSOX1O00391 747 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 UQCRHP07919 91 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 MST1P26927 711 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 VSX2P58304 361 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 EIF3EP60228 445 aaKnown RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 TCEAL1Q15170 157 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 SF1Q15637 639 aaKnown RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 ZNF630Q2M218 657 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 VWA2Q5GFL6 755 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 ZC3H12BQ5HYM0 836 aaKnown RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 YOD1Q5VVQ6 348 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 DARS2Q6PI48 645 aaKnown RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 VRK3Q8IV63 474 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 STT3BQ8TCJ2 826 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 PSMF1Q92530 271 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 MIEF2Q96C03 454 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 MENTQ9BUN1 341 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 TRIM8Q9BZR9 551 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.2■□□□□ 0.024e-7■□□□□ 10.9
DDX39A-216ENST00000591275 ABHD10Q9NUJ1 306 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 INTS7Q9NVH2 962 aaKnown RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 STOX2Q9P2F5 926 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 FEZ2Q9UHY8 353 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-216ENST00000591275 C3orf18Q9UK00 162 aa15.2■□□□□ 0.02
DDX39A-216ENST00000591275 CACNA1CQ13936 2221 aa15.19■□□□□ 0.02
DDX39A-216ENST00000591275 OR1I1O60431 355 aa15.19■□□□□ 0.02
DDX39A-216ENST00000591275 CTSVO60911 334 aa15.19■□□□□ 0.02
DDX39A-216ENST00000591275 USP1O94782 785 aa15.19■□□□□ 0.02
DDX39A-216ENST00000591275 CELA2AP08217 269 aa15.19■□□□□ 0.02
DDX39A-216ENST00000591275 ZGLP1P0C6A0 271 aa15.19■□□□□ 0.02
DDX39A-216ENST00000591275 OR56A5P0C7T3 313 aa15.19■□□□□ 0.02
DDX39A-216ENST00000591275 PRR35P0CG20 571 aa15.19■□□□□ 0.02
DDX39A-216ENST00000591275 RBP3P10745 1247 aa15.19■□□□□ 0.02
DDX39A-216ENST00000591275 CD9P21926 228 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms