RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 KPNA5O15131 536 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 PFDN6O15212 129 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 TTI1O43156 1089 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 SPAG6O75602 509 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 SEC31AO94979 1220 aaKnown RBP10.83□□□□□ -0.68
SMAD4-211ENST00000590499 CHRM5P08912 532 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-211ENST00000590499 MSL3P1P0C860 447 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 PKMP14618 531 aaKnown RBP10.83□□□□□ -0.68
SMAD4-211ENST00000590499 ST6GAL1P15907 406 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 UGT2B7P16662 529 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 CDH3P22223 829 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 MAP4P27816 1152 aaKnown RBP10.83□□□□□ -0.68
SMAD4-211ENST00000590499 ATP5DP30049 168 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 STAT5AP42229 794 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 PAFAH1B1P43034 410 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 RAB28P51157 221 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 CLCN7P51798 805 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 ETF1P62495 437 aaKnown RBP10.83□□□□□ -0.68
SMAD4-211ENST00000590499 TUBB4BP68371 445 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 ABHD18Q0P651 414 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 ABRQ12979 859 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 CTBP1Q13363 440 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 TUBB2AQ13885 445 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 CRYMQ14894 314 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 KIAA1614Q5VZ46 1190 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 PWWP2BQ6NUJ5 590 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 ZNF549Q6P9A3 640 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 CYB5D1Q6P9G0 228 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 SPESP1Q6UW49 350 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 PPP1R3BQ86XI6 285 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 IGDCC3Q8IVU1 814 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 UNC5BQ8IZJ1 945 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 IL22RA1Q8N6P7 574 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 LINC01555Q8NAE3 123 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 ZNF501Q96CX3 271 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-211ENST00000590499 HSH2DQ96JZ2 352 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 TRAPPC9Q96Q05 1148 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 OR2A14Q96R47 310 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 EBNA1BP2Q99848 306 aaKnown RBP10.83□□□□□ -0.68
SMAD4-211ENST00000590499 TUBB2BQ9BVA1 445 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 ULBP3Q9BZM4 244 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 CHRNA10Q9GZZ6 450 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 PDE7BQ9NP56 450 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 FGF21Q9NSA1 209 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 C20orf96Q9NUD7 363 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-211ENST00000590499 GALPQ9UBC7 116 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 RARRES3Q9UL19 164 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 PLAGL1Q9UM63 463 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 TDRKHQ9Y2W6 561 aaKnown RBP10.83□□□□□ -0.68
SMAD4-211ENST00000590499 NFS1Q9Y697 457 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 PCM1Q15154 2024 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 HEATR5BQ9P2D3 2071 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 LOC101059948A0A1B0GTJ6 334 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 PIPSLA2A3N6 862 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 KIAA0754O94854 1291 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 MATN4O95460 622 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 TTC4O95801 387 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 RPN2P04844 631 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 PVRP15151 417 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 ITGA8P53708 1063 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 MPP1Q00013 466 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 THOC5Q13769 683 aaKnown RBP10.82□□□□□ -0.68
SMAD4-211ENST00000590499 GPR19Q15760 415 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 ZIC1Q15915 447 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 CRTC2Q53ET0 693 aaPredicted RBP10.82□□□□□ -0.68
SMAD4-211ENST00000590499 HSP90AA5PQ58FG0 334 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 NKAPLQ5M9Q1 402 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 C6orf15Q6UXA7 325 aaPredicted RBP10.82□□□□□ -0.68
SMAD4-211ENST00000590499 SYT9Q86SS6 491 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 TRIM73Q86UV7 250 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 RASGRP3Q8IV61 690 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 CNTN4Q8IWV2 1026 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 ZBTB2Q8N680 514 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 ESX1Q8N693 406 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 LSM14AQ8ND56 463 aaKnown RBP10.82□□□□□ -0.68
SMAD4-211ENST00000590499 OR8K5Q8NH50 307 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 GIMAP7Q8NHV1 300 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 CALML6Q8TD86 181 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 RNF31Q96EP0 1072 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 WBP1Q96G27 269 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 SNF8Q96H20 258 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 ELMO2Q96JJ3 720 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 SLC45A3Q96JT2 553 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 PWWP2AQ96N64 755 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 KRT12Q99456 494 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 SLC30A3Q99726 388 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 NAT9Q9BTE0 207 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 SLC12A9Q9BXP2 914 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 FBXO6Q9NRD1 293 aaPredicted RBP10.82□□□□□ -0.68
SMAD4-211ENST00000590499 SOHLH2Q9NX45 425 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 KLHL42Q9P2K6 505 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 FBXO5Q9UKT4 447 aa10.82□□□□□ -0.68
SMAD4-211ENST00000590499 RUVBL2Q9Y230 463 aaKnown RBP10.82□□□□□ -0.68
SMAD4-211ENST00000590499 ANKRD12Q6UB98 2062 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 RASGRF2O14827 1237 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 KDM1AO60341 852 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 C1orf105O95561 183 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 CHRM3P20309 590 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 GABRB3P28472 473 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 BDKRB1P46663 353 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms