RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TSPAN17Q96FV3 270 aa20.78■□□□□ 0.92
R3HDM4-206ENST00000590454 SRMSQ9H3Y6 488 aa20.78■□□□□ 0.92
R3HDM4-206ENST00000590454 SNX15Q9NRS6 342 aa20.78■□□□□ 0.92
R3HDM4-206ENST00000590454 ANKMY1Q9P2S6 941 aa20.78■□□□□ 0.92
R3HDM4-206ENST00000590454 ZNF180Q9UJW8 692 aa20.78■□□□□ 0.92
R3HDM4-206ENST00000590454 PCDHB11Q9Y5F2 797 aa20.78■□□□□ 0.92
R3HDM4-206ENST00000590454 PCDHGA4Q9Y5G9 962 aa20.78■□□□□ 0.92
R3HDM4-206ENST00000590454 KIF26BQ2KJY2 2108 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 IGHV5-10-1A0A0J9YXX1 117 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 TRIM49D1C9J1S8 452 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 CDC7O00311 574 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 BTN3A1O00481 513 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 KIF1CO43896 1103 aaKnown RBP20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 RPN2P04844 631 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 POLR2CP19387 275 aaPredicted RBP20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 PKLRP30613 574 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 IRF9Q00978 393 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 DLG1Q12959 904 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 PHKG1Q16816 387 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 ADGRD1Q6QNK2 874 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 AMIGO1Q86WK6 493 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 SLITRK4Q8IW52 837 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 ADGRF3Q8IZF5 1079 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 LINC01555Q8NAE3 123 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 PDLIM5Q96HC4 596 aaKnown RBP20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 PPM1MQ96MI6 270 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 TGM7Q96PF1 710 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 PKP4Q99569 1192 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 SLC25A18Q9H1K4 315 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 HRASLS2Q9NWW9 162 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 SPHK1Q9NYA1 384 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 KLHL3Q9UH77 587 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 LOXL2Q9Y4K0 774 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 IKBKGQ9Y6K9 419 aa20.77■□□□□ 0.92
R3HDM4-206ENST00000590454 NPEPPSL1A6NEC2 478 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 OR5K3A6NET4 321 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 FOXO6A8MYZ6 492 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 CAPN5O15484 640 aaPredicted RBP20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 ZW10O43264 779 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 CATP04040 527 aaKnown RBP20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 CCDC166P0CW27 439 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 PEBP1P30086 187 aaKnown RBP20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 CCNFP41002 786 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 SLCO1A2P46721 670 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 SERPINB9P50453 376 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 TLE1Q04724 770 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 ZFP36L1Q07352 338 aaKnown RBP20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 SNAP47Q5SQN1 464 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 IRGCQ6NXR0 463 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 WDR74Q6RFH5 385 aaPredicted RBP20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 MBOAT1Q6ZNC8 495 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 RAPH1Q70E73 1250 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 NKAPQ8N5F7 415 aaKnown RBP20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 EPS8L3Q8TE67 593 aaKnown RBP20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 RAD51AP1Q96B01 352 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 ZMYND15Q9H091 742 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 SYTL2Q9HCH5 934 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 GEMIN8Q9NWZ8 242 aaKnown RBP20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 PDE10AQ9Y233 779 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 ANKRD12Q6UB98 2062 aa20.76■□□□□ 0.91
R3HDM4-206ENST00000590454 SMIM23A6NLE4 172 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 MYO1CO00159 1063 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 RASGRF2O14827 1237 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 C2P06681 752 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 TUBBP07437 444 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 FASTKQ14296 549 aaKnown RBP20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 LRRC8EQ6NSJ5 796 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 TMEM71Q6P5X7 295 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 FAM92BQ6ZTR7 304 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 VASH2Q86V25 355 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 TAX1BP1Q86VP1 789 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 MREGQ8N565 214 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 RCBTB1Q8NDN9 531 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 OR4D9Q8NGE8 314 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 OR9A1PQ8NGU1 263 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 UBXN10Q96LJ8 280 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 CCDC74BQ96LY2 380 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 SLC12A9Q9BXP2 914 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 EPB41L1Q9H4G0 881 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 IGSF5Q9NSI5 407 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 FETUBQ9UGM5 382 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 TBK1Q9UHD2 729 aa20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 MN1Q10571 1320 aaPredicted RBP20.75■□□□□ 0.91
R3HDM4-206ENST00000590454 A8MU76 341 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 CTIFO43310 598 aaKnown RBP20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 ZBTB14O43829 449 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 KRT38O76015 456 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 SYF2O95926 243 aaKnown RBP20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 C9P02748 559 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 C8GP07360 202 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 CHRM5P08912 532 aaPredicted RBP20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 CD1DP15813 335 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 CRABP2P29373 138 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 TYK2P29597 1187 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 SHMT2P34897 504 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 MAGEA12P43365 314 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 SERPINB8P50452 374 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 RAB28P51157 221 aa20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 KPNA2P52292 529 aaKnown RBP20.74■□□□□ 0.91
R3HDM4-206ENST00000590454 UBAP2LQ14157 1087 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms