RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 SPAG7O75391 227 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 SUPT3HO75486 399 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 RFPL3O75679 317 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 DKK1O94907 266 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 FKBP9O95302 570 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 PROCP04070 461 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 RPLP0P05388 317 aaKnown RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 SBK3P0C264 359 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 POLR2CP19387 275 aaPredicted RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 CAPZBP47756 277 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 ALDH18A1P54886 795 aaKnown RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 AMZ1Q400G9 498 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 NKAIN2Q5VXU1 208 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 CAPN13Q6MZZ7 669 aaPredicted RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 TMEM71Q6P5X7 295 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 USP53Q70EK8 1073 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 KLHDC8AQ8IYD2 350 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 LRRC56Q8IYG6 542 aaPredicted RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 CARFQ8N187 725 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 TCP10LQ8TDR4 215 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 JPH3Q8WXH2 748 aaPredicted RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 CCDC126Q96EE4 140 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 IL17FQ96PD4 163 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 GFM1Q96RP9 751 aaKnown RBP11.77□□□□□ -0.53
DNMT1-218ENST00000589294 CD180Q99467 661 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 MIPEPQ99797 713 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 SGPP1Q9BX95 441 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 TOR4AQ9NXH8 423 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 PDP2Q9P2J9 529 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 CIDEBQ9UHD4 219 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 MID2Q9UJV3 735 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 EMCNQ9ULC0 261 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 PCDHB11Q9Y5F2 797 aa11.77□□□□□ -0.53
DNMT1-218ENST00000589294 A0A1W2PPV9 198 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 KRT87PA6NCN2 255 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 NCF1BA6NI72 391 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 NCF1CA8MVU1 366 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 ISM1B1AKI9 464 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 TMX2-CTNND1H3BSU7 103 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 TK2O00142 265 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 TOX3O15405 576 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 CAPN5O15484 640 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 TAPBPO15533 448 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 STK16O75716 305 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 ZWINTO95229 277 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 KCNK5O95279 499 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 C9P02748 559 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 GFAPP14136 432 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 NCF1P14598 390 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 CPA3P15088 417 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 ATP5F1P24539 256 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 OAS2P29728 719 aaKnown RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 PRDX3P30048 256 aaKnown RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 RPA3P35244 121 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 SLC6A12P48065 614 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 PPM1FP49593 454 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 SIM1P81133 766 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 CFHR1Q03591 330 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 GPS2Q13227 327 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 NAE1Q13564 534 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 FASTKQ14296 549 aaKnown RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 PFKFB4Q16877 469 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 SLC5A12Q1EHB4 618 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 ZXDCQ2QGD7 858 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 MBOAT1Q6ZNC8 495 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 SLCO6A1Q86UG4 719 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 SLC22A9Q8IVM8 553 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 FBXO39Q8N4B4 442 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 LMNTD1Q8N9Z9 388 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 OR4D9Q8NGE8 314 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 RSC1A1Q92681 617 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 OR2A14Q96R47 310 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 NRTNQ99748 197 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 HAUS8Q9BT25 410 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 CAPS2Q9BXY5 557 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 CD244Q9BZW8 370 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 ATG10Q9H0Y0 220 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 KCNK9Q9NPC2 374 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 CCDC177Q9NQR7 707 aaPredicted RBP11.76□□□□□ -0.53
DNMT1-218ENST00000589294 SPHK1Q9NYA1 384 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 DLL3Q9NYJ7 618 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 ACTR10Q9NZ32 417 aa11.76□□□□□ -0.53
DNMT1-218ENST00000589294 RP1P56715 2156 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 CNOT1A5YKK6 2376 aaKnown RBP11.75□□□□□ -0.53
DNMT1-218ENST00000589294 SPAARA0A1B0GVQ0 90 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 GSAPA4D1B5 854 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 G3V2L1 256 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 STX16-NPEPL1H3BU86 382 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 STX16O14662 325 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 DLX3O60479 287 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 CCNDBP1O95273 360 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 MYL2P10916 166 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 NPPBP16860 134 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 IMPDH1P20839 514 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 HRH2P25021 359 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 NOVA1P51513 510 aaKnown RBP11.75□□□□□ -0.53
DNMT1-218ENST00000589294 PRKAA2P54646 552 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 ABATP80404 500 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 NFKB2Q00653 900 aa11.75□□□□□ -0.53
DNMT1-218ENST00000589294 PRDX1Q06830 199 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms