RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 GPC4O75487 556 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 SASH3O75995 380 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 CYP2A7P20853 494 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 AOAHP28039 575 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 SHMT2P34897 504 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 GPX6P59796 221 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 MC1RQ01726 317 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 PLOD1Q02809 727 aaPredicted RBP11.16□□□□□ -0.62
RFX1-204ENST00000588885 CBLBQ13191 982 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 GPS2Q13227 327 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 KCNAB2Q13303 367 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 ZIC1Q15915 447 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 KYNUQ16719 465 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 DEFB110Q30KQ9 67 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 FAM69BQ5VUD6 431 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 MRNIPQ6NTE8 343 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 ATG14Q6ZNE5 492 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 CDHR3Q6ZTQ4 885 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 TRMT10CQ7L0Y3 403 aaKnown RBP11.16□□□□□ -0.62
RFX1-204ENST00000588885 SDCCAG8Q86SQ7 713 aaPredicted RBP11.16□□□□□ -0.62
RFX1-204ENST00000588885 PTRH1Q86Y79 214 aaKnown RBP11.16□□□□□ -0.62
RFX1-204ENST00000588885 SLC22A15Q8IZD6 547 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 GSDMBQ8TAX9 411 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 PYROXD1Q8WU10 500 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 N4BP2L2Q92802 583 aaPredicted RBP11.16□□□□□ -0.62
RFX1-204ENST00000588885 PEX13Q92968 403 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 ZNF669Q96BR6 464 aaPredicted RBP11.16□□□□□ -0.62
RFX1-204ENST00000588885 LRRC39Q96DD0 335 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 CLIP3Q96DZ5 547 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 FCRL4Q96PJ5 515 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 EBNA1BP2Q99848 306 aaKnown RBP11.16□□□□□ -0.62
RFX1-204ENST00000588885 PITPNM3Q9BZ71 974 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 P2RY12Q9H244 342 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 CHST8Q9H2A9 424 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 ACTL8Q9H568 366 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 FANCEQ9HB96 536 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 FAM60AQ9NP50 221 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 ZNF71Q9NQZ8 489 aaPredicted RBP11.16□□□□□ -0.62
RFX1-204ENST00000588885 GEMIN8Q9NWZ8 242 aaKnown RBP11.16□□□□□ -0.62
RFX1-204ENST00000588885 GNPTGQ9UJJ9 305 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 SERTAD3Q9UJW9 196 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 KCND3Q9UK17 655 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 CRYL1Q9Y2S2 319 aa11.16□□□□□ -0.62
RFX1-204ENST00000588885 SDR42E2A6NKP2 422 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 HCRTR1O43613 425 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 CREG1O75629 220 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 TTC4O95801 387 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 SHBGP04278 402 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 CTSBP07858 339 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 PGAM1P18669 254 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 SSTR1P30872 391 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 RPS15P62841 145 aaKnown RBP11.15□□□□□ -0.62
RFX1-204ENST00000588885 EFTUD2Q15029 972 aaKnown RBP eCLIP11.15□□□□□ -0.62
RFX1-204ENST00000588885 TMED2Q15363 201 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 PTCHD3Q3KNS1 767 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 COLEC12Q5KU26 742 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 CTSL3PQ5NE16 218 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 PLEKHS1Q5SXH7 462 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 STEAP4Q687X5 459 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 NEPROQ6NW34 567 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 OTOAQ7RTW8 1153 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 CARFQ8N187 725 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 C19orf47Q8N9M1 422 aaKnown RBP11.15□□□□□ -0.62
RFX1-204ENST00000588885 OR8K5Q8NH50 307 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 OR2W6PQ8NHA6 318 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 APOBEC4Q8WW27 367 aaKnown RBP11.15□□□□□ -0.62
RFX1-204ENST00000588885 ZBTB9Q96C00 473 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 CATSPER2Q96P56 530 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 SLC7A5P2Q9GIP4 190 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 SPRTNQ9H040 489 aaPredicted RBP11.15□□□□□ -0.62
RFX1-204ENST00000588885 MRM3Q9HC36 420 aaKnown RBP11.15□□□□□ -0.62
RFX1-204ENST00000588885 LRRC4CQ9HCJ2 640 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 STARD5Q9NSY2 213 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 OR6C2Q9NZP2 312 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 SAMD15Q9P1V8 674 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 GALPQ9UBC7 116 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 ZC3H7BQ9UGR2 993 aaKnown RBP11.15□□□□□ -0.62
RFX1-204ENST00000588885 NFS1Q9Y697 457 aa11.15□□□□□ -0.62
RFX1-204ENST00000588885 TENM4Q6N022 2769 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 MEN1O00255 615 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 ZNF749O43361 778 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 NIPSNAP2O75323 286 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 SLCO2B1O94956 709 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 WISP1O95388 367 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 KLK3P07288 261 aaPredicted RBP11.14□□□□□ -0.63
RFX1-204ENST00000588885 ABHD2P08910 425 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 CHRM3P20309 590 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 RPS3P23396 243 aaKnown RBP eCLIP11.14□□□□□ -0.63
RFX1-204ENST00000588885 PEBP1P30086 187 aaKnown RBP11.14□□□□□ -0.63
RFX1-204ENST00000588885 BDKRB1P46663 353 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 ITGA1P56199 1179 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 CRYMQ14894 314 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 CCSMST1Q4G0I0 132 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 ANKRD20A4Q4UJ75 823 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 ZNF789Q5FWF6 425 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 C1orf189Q5VU69 101 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 CNSTQ6PJW8 725 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 LINC01555Q8NAE3 123 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 FLVCR1-AS1Q8TAF5 88 aa11.14□□□□□ -0.63
RFX1-204ENST00000588885 LPGAT1Q92604 370 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms