RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CUTCQ9NTM9 273 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 CIDEBQ9UHD4 219 aa17.65■□□□□ 0.42
CCDC43-204ENST00000588687 LRRTM2O43300 516 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 NRP2O60462 931 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 CTSVO60911 334 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 EDN3P14138 238 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 PRF1P14222 555 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 ALAS2P22557 587 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 CSE1LP55060 971 aaKnown RBP17.64■□□□□ 0.41
CCDC43-204ENST00000588687 ZNF169Q14929 603 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-204ENST00000588687 SPA17Q15506 151 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 AGAP7PQ5VUJ5 663 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 SHISA6Q6ZSJ9 500 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 TAX1BP1Q86VP1 789 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 DCUN1D3Q8IWE4 304 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 OR52K1Q8NGK4 314 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 OR2L8Q8NGY9 312 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 COG1Q8WTW3 980 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 FAR1Q8WVX9 515 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 AGAP4Q96P64 663 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 TMEM121Q9BTD3 319 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 LACRTQ9GZZ8 138 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 SOX17Q9H6I2 414 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-204ENST00000588687 KLK4Q9Y5K2 254 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 CPAMD8Q8IZJ3 1885 aa17.64■□□□□ 0.41
CCDC43-204ENST00000588687 TCRBV7S2A1N4TA0A589 114 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 SOWAHDA6NJG2 315 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 KDM1AO60341 852 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 S1PR4O95977 384 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 GOT2P00505 430 aaKnown RBP17.63■□□□□ 0.41
CCDC43-204ENST00000588687 GRIA3P42263 894 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 ZRSR2Q15696 482 aaKnown RBP17.63■□□□□ 0.41
CCDC43-204ENST00000588687 TUBB8Q3ZCM7 444 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 YOD1Q5VVQ6 348 aaPredicted RBP17.63■□□□□ 0.41
CCDC43-204ENST00000588687 AFTPHQ6ULP2 937 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 UNC5DQ6UXZ4 953 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 TAB3Q8N5C8 712 aaPredicted RBP17.63■□□□□ 0.41
CCDC43-204ENST00000588687 C2orf73Q8N5S3 287 aaPredicted RBP17.63■□□□□ 0.41
CCDC43-204ENST00000588687 HDAC10Q969S8 669 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 CALR3Q96L12 384 aaKnown RBP17.63■□□□□ 0.41
CCDC43-204ENST00000588687 LHPPQ9H008 270 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 NXT1Q9UKK6 140 aaKnown RBP17.63■□□□□ 0.41
CCDC43-204ENST00000588687 RIMKLBQ9ULI2 386 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 OSGIN2Q9Y236 505 aa17.63■□□□□ 0.41
CCDC43-204ENST00000588687 IQCF5A8MTL0 148 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 RASGRF2O14827 1237 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 SUN1O94901 812 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 SLCO2B1O94956 709 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 STSP08842 583 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 CYLC1P35663 651 aaPredicted RBP17.62■□□□□ 0.41
CCDC43-204ENST00000588687 GRIA1P42261 906 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 OR1D4P47884 311 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 HSPA14Q0VDF9 509 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 GRM7Q14831 915 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 TSTD2Q5T7W7 516 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 ZNF324BQ6AW86 544 aaPredicted RBP17.62■□□□□ 0.41
CCDC43-204ENST00000588687 FIGLAQ6QHK4 219 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 PARP9Q8IXQ6 854 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 SLC34A3Q8N130 599 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 METTL27Q8N6F8 245 aaPredicted RBP17.62■□□□□ 0.41
CCDC43-204ENST00000588687 DNAJB14Q8TBM8 379 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 DENND1AQ8TEH3 1009 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 SLC22A18Q96BI1 424 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 TSPY26PQ9H489 355 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 SEMA3GQ9NS98 782 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 ENTPD4Q9Y227 616 aa17.62■□□□□ 0.41
CCDC43-204ENST00000588687 KRT87PA6NCN2 255 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 ZG16O60844 167 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 KLHL18O94889 574 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 AOAHP28039 575 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 PSMB5P28074 263 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 TDGF1P3P51864 188 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 CDH17Q12864 832 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 CDC16Q13042 620 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 MFAP5Q13361 173 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 TLR1Q15399 786 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 TCTE1Q5JU00 501 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 FRMPD2BQ6IN97 320 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 LINC00523Q86TU6 105 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 CNDP1Q96KN2 507 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 SELENOSQ9BQE4 189 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 CARD6Q9BX69 1037 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 EPS8L2Q9H6S3 715 aa17.61■□□□□ 0.41
CCDC43-204ENST00000588687 PACSIN2Q9UNF0 486 aaPredicted RBP17.61■□□□□ 0.41
CCDC43-204ENST00000588687 EPN1Q9Y6I3 576 aaPredicted RBP17.61■□□□□ 0.41
CCDC43-204ENST00000588687 IGLV3-12A0A075B6K2 115 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 A0A1W2PPV9 198 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 A0A1W2PQ72 361 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 HEATR9A2RTY3 570 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 ERI2A8K979 691 aaKnown RBP17.6■□□□□ 0.41
CCDC43-204ENST00000588687 PSMD3O43242 534 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 PIM1P11309 404 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-204ENST00000588687 SOX11P35716 441 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 RBBP7Q16576 425 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 CCSMST1Q4G0I0 132 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 ZC3H12BQ5HYM0 836 aaKnown RBP17.6■□□□□ 0.41
CCDC43-204ENST00000588687 RPUSD3Q6P087 351 aaKnown RBP17.6■□□□□ 0.41
CCDC43-204ENST00000588687 RNF44Q7L0R7 432 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 KRT222Q8N1A0 295 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 OR4L1Q8NH43 312 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms