RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 E9PQ18 207 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 ULK1O75385 1050 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 MYCLP1P12525 358 aaPredicted RBP16.06■□□□□ 0.16
RANBP3-209ENST00000587411 ETV6P41212 452 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 CLCN7P51798 805 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 CACNB2Q08289 660 aaPredicted RBP16.06■□□□□ 0.16
RANBP3-209ENST00000587411 FBXO43Q4G163 708 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 USP39Q53GS9 565 aaKnown RBP16.06■□□□□ 0.16
RANBP3-209ENST00000587411 SLC46A3Q7Z3Q1 461 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 CCDC71Q8IV32 467 aaPredicted RBP16.06■□□□□ 0.16
RANBP3-209ENST00000587411 P3H2Q8IVL5 708 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 SCN4BQ8IWT1 228 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 STK40Q8N2I9 435 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 OR10Q1Q8NGQ4 319 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 TP53INP1Q96A56 240 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 TNKS2Q9H2K2 1166 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 SERHLQ9NQF3 203 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 SAMHD1Q9Y3Z3 626 aaKnown RBP16.06■□□□□ 0.16
RANBP3-209ENST00000587411 ANGPTL3Q9Y5C1 460 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 TBKBP1A7MCY6 615 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 M0R082 166 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 DSCR3O14972 297 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 PCDHGA12O60330 932 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 HOXB9P17482 250 aaPredicted RBP16.05■□□□□ 0.16
RANBP3-209ENST00000587411 S100A3P33764 101 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 GGT5P36269 586 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 RPP38P78345 283 aaKnown RBP16.05■□□□□ 0.16
RANBP3-209ENST00000587411 CREMQ03060 361 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 NPRL3Q12980 569 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 ZRANB3Q5FWF4 1079 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 FAHD1Q6P587 224 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 SUSD1Q6UWL2 747 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 CIR1Q86X95 450 aaPredicted RBP16.05■□□□□ 0.16
RANBP3-209ENST00000587411 SLC22A15Q8IZD6 547 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 FAM9CQ8IZT9 166 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 C10orf111Q8N326 155 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 APH1BQ8WW43 257 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 PLCXD1Q9NUJ7 323 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 TRPS1Q9UHF7 1281 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 FKBPLQ9UIM3 349 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 PCDHGB6Q9Y5F9 930 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 LOC110117498-PIK3R3F6TDL0 507 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 SEMG1P04279 462 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 POLR2EP19388 210 aaKnown RBP16.05■□□□□ 0.16
RANBP3-209ENST00000587411 HMGCS1Q01581 520 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 EFEMP1Q12805 493 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 MLIPQ5VWP3 458 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 VASH1Q7L8A9 365 aaPredicted RBP16.05■□□□□ 0.16
RANBP3-209ENST00000587411 PIK3R3Q92569 461 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 DNASE1L2Q92874 299 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 FBXO44Q9H4M3 255 aa16.05■□□□□ 0.16
RANBP3-209ENST00000587411 ZNF490Q9ULM2 529 aaPredicted RBP16.05■□□□□ 0.16
RANBP3-209ENST00000587411 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.05■□□□□ 0.16
RANBP3-209ENST00000587411 FFAR3O14843 346 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 GPR42O15529 346 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 ZW10O43264 779 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 ARHGEF15O94989 841 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 BCKDHAP12694 445 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 HSPA7P48741 367 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 SERPINA11Q86U17 422 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 ENTHD1Q8IYW4 607 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 DOCK4Q8N1I0 1966 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 REEP1Q9H902 201 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 PSORS1C1Q9UIG5 152 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 ST3GAL5Q9UNP4 418 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 POLR2AP24928 1970 aaKnown RBP16.04■□□□□ 0.16
RANBP3-209ENST00000587411 EVPLLA8MZ36 301 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 PCSK2P16519 638 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 EPHA2P29317 976 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 CLDN8P56748 225 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 RPS14P62263 151 aaKnown RBP16.04■□□□□ 0.16
RANBP3-209ENST00000587411 DMPKQ09013 629 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 PRSS36Q5K4E3 855 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 SPANXN2Q5MJ10 180 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 CD300LGQ6UXG3 332 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 MOB2Q70IA6 237 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 RGL4Q8IZJ4 473 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 HRASLS5Q96KN8 279 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 PSKH2Q96QS6 385 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 CCDC32Q9BV29 185 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 GABARAPL3Q9BY60 117 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 NUAK2Q9H093 628 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 P2RY12Q9H244 342 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 NSUN3Q9H649 340 aaKnown RBP16.04■□□□□ 0.16
RANBP3-209ENST00000587411 PCDHB1Q9Y5F3 818 aa16.04■□□□□ 0.16
RANBP3-209ENST00000587411 PTPRDP23468 1912 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 PDZK1P1A8MUH7 402 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 M0QZ92 97 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 MANBAO00462 879 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 KMOO15229 486 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 DPM1O60762 260 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 PARNO95453 639 aaKnown RBP16.03■□□□□ 0.16
RANBP3-209ENST00000587411 TYMPP19971 482 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 PTPN6P29350 595 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 MAGEA11P43364 429 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 ITGA1P56199 1179 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 CAMK2GQ13555 558 aaPredicted RBP16.03■□□□□ 0.16
RANBP3-209ENST00000587411 FAM171A1Q5VUB5 890 aa16.03■□□□□ 0.16
RANBP3-209ENST00000587411 METTL2BQ6P1Q9 378 aaKnown RBP16.03■□□□□ 0.16
RANBP3-209ENST00000587411 RNF19BQ6ZMZ0 732 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms