RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 FIGLAQ6QHK4 219 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 ATG14Q6ZNE5 492 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 KCNMB4Q86W47 210 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 KLHL7Q8IXQ5 586 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 SLCO2A1Q92959 643 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 NAPGQ99747 312 aaPredicted RBP17.02■□□□□ 0.32
TPM4-206ENST00000587201 IARS2Q9NSE4 1012 aaKnown RBP17.02■□□□□ 0.32
TPM4-206ENST00000587201 TXLNGQ9NUQ3 528 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 SPATA7Q9P0W8 599 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 DHCR7Q9UBM7 475 aaKnown RBP17.02■□□□□ 0.32
TPM4-206ENST00000587201 PCYOX1Q9UHG3 505 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 SRPK3Q9UPE1 567 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 GCN1Q92616 2671 aaKnown RBP17.01■□□□□ 0.31
TPM4-206ENST00000587201 PRICKLE3O43900 615 aaPredicted RBP17.01■□□□□ 0.31
TPM4-206ENST00000587201 FKBP9O95302 570 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 PGAM1P18669 254 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 PTGIRP43119 386 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 CLCN7P51798 805 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 DHX9Q08211 1270 aaKnown RBP17.01■□□□□ 0.31
TPM4-206ENST00000587201 NCF4Q15080 339 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 HSP90AA5PQ58FG0 334 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 ZC3H12BQ5HYM0 836 aaKnown RBP17.01■□□□□ 0.31
TPM4-206ENST00000587201 FAM69BQ5VUD6 431 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 MLIPQ5VWP3 458 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 FCRL6Q6DN72 434 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 CREG2Q8IUH2 290 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 MCATQ8IVS2 390 aaKnown RBP17.01■□□□□ 0.31
TPM4-206ENST00000587201 APLFQ8IW19 511 aaPredicted RBP17.01■□□□□ 0.31
TPM4-206ENST00000587201 OR9A1PQ8NGU1 263 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 HMGCLL1Q8TB92 370 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 PROKR1Q8TCW9 393 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 DENND1AQ8TEH3 1009 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 SLC30A3Q99726 388 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 MIPEPQ99797 713 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 C17orf62Q9BQA9 187 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 FAM167BQ9BTA0 163 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 NDC1Q9BTX1 674 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 TRIM4Q9C037 500 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 GPN3Q9UHW5 284 aaPredicted RBP17.01■□□□□ 0.31
TPM4-206ENST00000587201 TLK1Q9UKI8 766 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 FBXO5Q9UKT4 447 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 PYCARDQ9ULZ3 195 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 TP53TG5Q9Y2B4 290 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 SAR1BQ9Y6B6 198 aa17.01■□□□□ 0.31
TPM4-206ENST00000587201 TLN1Q9Y490 2541 aaKnown RBP17■□□□□ 0.31
TPM4-206ENST00000587201 ARGFXA6NJG6 315 aa17■□□□□ 0.31
TPM4-206ENST00000587201 ARHGEF33A8MVX0 844 aa17■□□□□ 0.31
TPM4-206ENST00000587201 PSIP1O75475 530 aaKnown RBP17■□□□□ 0.31
TPM4-206ENST00000587201 HAUS5O94927 633 aa17■□□□□ 0.31
TPM4-206ENST00000587201 CATP04040 527 aaKnown RBP17■□□□□ 0.31
TPM4-206ENST00000587201 PSMB5P28074 263 aa17■□□□□ 0.31
TPM4-206ENST00000587201 GRIA3P42263 894 aa17■□□□□ 0.31
TPM4-206ENST00000587201 DCDP81605 110 aaKnown RBP17■□□□□ 0.31
TPM4-206ENST00000587201 MPP1Q00013 466 aa17■□□□□ 0.31
TPM4-206ENST00000587201 CUL1Q13616 776 aa17■□□□□ 0.31
TPM4-206ENST00000587201 FASTKQ14296 549 aaKnown RBP17■□□□□ 0.31
TPM4-206ENST00000587201 CRYMQ14894 314 aa17■□□□□ 0.31
TPM4-206ENST00000587201 CYP2A13Q16696 494 aa17■□□□□ 0.31
TPM4-206ENST00000587201 EEF1AKMT2Q5JPI9 291 aaKnown RBP17■□□□□ 0.31
TPM4-206ENST00000587201 ZNF549Q6P9A3 640 aa17■□□□□ 0.31
TPM4-206ENST00000587201 GABPB2Q8TAK5 448 aaPredicted RBP17■□□□□ 0.31
TPM4-206ENST00000587201 KCNJ9Q92806 393 aa17■□□□□ 0.31
TPM4-206ENST00000587201 ZUFSPQ96AP4 578 aa17■□□□□ 0.31
TPM4-206ENST00000587201 RUNDC3BQ96NL0 473 aa17■□□□□ 0.31
TPM4-206ENST00000587201 GBP5Q96PP8 586 aa17■□□□□ 0.31
TPM4-206ENST00000587201 EBNA1BP2Q99848 306 aaKnown RBP17■□□□□ 0.31
TPM4-206ENST00000587201 DHRS4Q9BTZ2 278 aa17■□□□□ 0.31
TPM4-206ENST00000587201 ACSS2Q9NR19 701 aa17■□□□□ 0.31
TPM4-206ENST00000587201 FAM114A2Q9NRY5 505 aa17■□□□□ 0.31
TPM4-206ENST00000587201 PADI2Q9Y2J8 665 aa17■□□□□ 0.31
TPM4-206ENST00000587201 COMMD10Q9Y6G5 202 aa17■□□□□ 0.31
TPM4-206ENST00000587201 SPTA1P02549 2419 aa17■□□□□ 0.31
TPM4-206ENST00000587201 SNRNP200O75643 2136 aaKnown RBP16.99■□□□□ 0.31
TPM4-206ENST00000587201 HELZ2Q9BYK8 2649 aaKnown RBP16.99■□□□□ 0.31
TPM4-206ENST00000587201 TARM1B6A8C7 271 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 BANF1O75531 89 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 DNAJB5O75953 348 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 ALAS2P22557 587 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 PAFAH1B1P43034 410 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 CHAF1BQ13112 559 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 BBS9Q3SYG4 887 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 CPZQ66K79 652 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 TCTN3Q6NUS6 607 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 SYDE1Q6ZW31 735 aaPredicted RBP16.99■□□□□ 0.31
TPM4-206ENST00000587201 NEK10Q6ZWH5 1172 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 OR2L3Q8NG85 312 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 GIMAP7Q8NHV1 300 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 ADAMTS17Q8TE56 1095 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 DLG3Q92796 817 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 INPP5DQ92835 1189 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 GPR21Q99679 349 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 TRIM55Q9BYV6 548 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 IFT80Q9P2H3 777 aaPredicted RBP16.99■□□□□ 0.31
TPM4-206ENST00000587201 KLHL42Q9P2K6 505 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 NDOR1Q9UHB4 597 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 MED16Q9Y2X0 877 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 DHRS7Q9Y394 339 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 BOD1L1Q8NFC6 3051 aa16.99■□□□□ 0.31
TPM4-206ENST00000587201 A0A1W2PPV9 198 aa16.98■□□□□ 0.31
TPM4-206ENST00000587201 VPS26AO75436 327 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms