RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 COPS2P61201 443 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 SEMA3AQ14563 771 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 TUBB8Q3ZCM7 444 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 CCDC38Q502W7 563 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 RPUSD3Q6P087 351 aaKnown RBP11.37□□□□□ -0.59
BRCA1-225ENST00000586385 FIGLAQ6QHK4 219 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 ISLR2Q6UXK2 745 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 TMTC1Q8IUR5 882 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 SLC22A15Q8IZD6 547 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 OR13J1Q8NGT2 312 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 COG1Q8WTW3 980 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 ITLN2Q8WWU7 325 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-225ENST00000586385 DLG3Q92796 817 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 C8orf44Q96CB5 159 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 PHF12Q96QT6 1004 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 LMF1Q96S06 567 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 SYNPO2LQ9H987 977 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 MRM3Q9HC36 420 aaKnown RBP11.37□□□□□ -0.59
BRCA1-225ENST00000586385 OLAHQ9NV23 265 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 STOX2Q9P2F5 926 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-225ENST00000586385 SLC2A6Q9UGQ3 507 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 PCDHA3Q9Y5H8 950 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 MAU2Q9Y6X3 613 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 NUP210LQ5VU65 1888 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 POLQO75417 2590 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 LOC105369274A0A096LPK9 316 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 LOC102723532A0A0G2JNH3 316 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 IQCF5A8MTL0 148 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 JRKO75564 520 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 TPM3P06753 285 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 CD9P21926 228 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 PSMB5P28074 263 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 YBX1P67809 324 aaKnown RBP11.36□□□□□ -0.59
BRCA1-225ENST00000586385 SRSF11Q05519 484 aaKnown RBP11.36□□□□□ -0.59
BRCA1-225ENST00000586385 KLC1Q07866 573 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 RBBP7Q16576 425 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 PARP6Q2NL67 630 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 SYTL3Q4VX76 610 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 DNAJC21Q5F1R6 531 aaKnown RBP11.36□□□□□ -0.59
BRCA1-225ENST00000586385 CCDC181Q5TID7 509 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 ATG9BQ674R7 924 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 FRMPD2BQ6IN97 320 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 ZNF534Q76KX8 674 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 OR4N4Q8N0Y3 316 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 BCORP1Q8N888 145 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 FAM71DQ8N9W8 422 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 OR1N1Q8NGS0 311 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 OR2L8Q8NGY9 312 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 NR4A3Q92570 626 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 ZNF778Q96MU6 729 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 EPS8L2Q9H6S3 715 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 ZNF160Q9HCG1 818 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 LUC7LQ9NQ29 371 aaKnown RBP11.36□□□□□ -0.59
BRCA1-225ENST00000586385 SEMA3GQ9NS98 782 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 PLA2G3Q9NZ20 509 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 COPG2Q9UBF2 871 aa11.36□□□□□ -0.59
BRCA1-225ENST00000586385 NXT1Q9UKK6 140 aaKnown RBP11.36□□□□□ -0.59
BRCA1-225ENST00000586385 CSMD2Q7Z408 3487 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 A0A1B0GUH1 482 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 QSOX1O00391 747 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 STK10O94804 968 aaKnown RBP11.35□□□□□ -0.59
BRCA1-225ENST00000586385 S1PR4O95977 384 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 HPP00738 406 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 CELA2AP08217 269 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 COX6A1P12074 109 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 MST1P26927 711 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 EFNA3P52797 238 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 PLOD1Q02809 727 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-225ENST00000586385 ART3Q13508 389 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 GRM7Q14831 915 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 CCSMST1Q4G0I0 132 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 YOD1Q5VVQ6 348 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-225ENST00000586385 FAM180AQ6UWF9 173 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 ARHGEF18Q6ZSZ5 1173 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 LAPTM4BQ86VI4 370 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 PRSS58Q8IYP2 241 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 TAB3Q8N5C8 712 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-225ENST00000586385 TC2NQ8N9U0 490 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 STT3BQ8TCJ2 826 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 DENND1AQ8TEH3 1009 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 C10orf90Q96M02 699 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 PPP1R2P1Q96PQ5 205 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 SELENOSQ9BQE4 189 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 CRB3Q9BUF7 120 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 LRRC40Q9H9A6 602 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 R3HDM2Q9Y2K5 976 aaKnown RBP11.35□□□□□ -0.59
BRCA1-225ENST00000586385 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.35□□□□□ -0.59
BRCA1-225ENST00000586385 PCDHA13Q9Y5I0 950 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 KLK4Q9Y5K2 254 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 DUSP10Q9Y6W6 482 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 C2CD3Q4AC94 2353 aa11.35□□□□□ -0.59
BRCA1-225ENST00000586385 ADGRG4Q8IZF6 3080 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 IGLV3-12A0A075B6K2 115 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 A0A1W2PPV9 198 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 A0A1W2PQ72 361 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 RASGRF2O14827 1237 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 CBFA2T2O43439 604 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 SLCO2B1O94956 709 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 GOT2P00505 430 aaKnown RBP11.34□□□□□ -0.59
BRCA1-225ENST00000586385 ZGLP1P0C6A0 271 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms