RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 DNMT3AQ9Y6K1 912 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 MAGEA13PA6NCF6 341 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 H0YJX3 145 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 PRMT3O60678 531 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 MMP20O60882 483 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 GPIP06744 558 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 FCGR1AP12314 374 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 UQCRBP14927 111 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 P2RY2P41231 377 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 CASP2P42575 452 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 MTHFRP42898 656 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 TNFRSF4P43489 277 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 GSK3BP49841 420 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 CLCN2P51788 898 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 CLDN8P56748 225 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 RPS14P62263 151 aaKnown RBP10.95□□□□□ -0.66
LIG3-204ENST00000585740 HMGCS1Q01581 520 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 MESP2Q0VG99 397 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 HYAL1Q12794 435 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 RPA4Q13156 261 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 ENPP2Q13822 863 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 CPSF6Q16630 551 aaKnown RBP eCLIP10.95□□□□□ -0.66
LIG3-204ENST00000585740 ZNF658BQ4V348 819 aaPredicted RBP10.95□□□□□ -0.66
LIG3-204ENST00000585740 USP39Q53GS9 565 aaKnown RBP10.95□□□□□ -0.66
LIG3-204ENST00000585740 SGO1Q5FBB7 561 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 MTX3Q5HYI7 312 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 FRG2Q64ET8 278 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 GRHL2Q6ISB3 625 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 ANO7Q6IWH7 933 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 MTSS1LQ765P7 747 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 THOC6Q86W42 341 aaKnown RBP10.95□□□□□ -0.66
LIG3-204ENST00000585740 TRAPPC5Q8IUR0 188 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 LIX1Q8N485 282 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 OR2L2Q8NH16 312 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 CSGALNACT1Q8TDX6 532 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 SLC13A3Q8WWT9 602 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 POP5Q969H6 163 aaKnown RBP10.95□□□□□ -0.66
LIG3-204ENST00000585740 REPS1Q96D71 796 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 HIC2Q96JB3 615 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 RIPOR3Q96MK2 946 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 FRG2BQ96QU4 278 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 CGREF1Q99674 301 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 KCTD14Q9BQ13 255 aaPredicted RBP10.95□□□□□ -0.66
LIG3-204ENST00000585740 SLC39A3Q9BRY0 314 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 OSBPL6Q9BZF3 934 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 ACPTQ9BZG2 426 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 OR2AG1Q9H205 316 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 ALG2Q9H553 416 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 ACTL8Q9H568 366 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 CLMPQ9H6B4 373 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 CD320Q9NPF0 282 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 ITM2CQ9NQX7 267 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 ZNHIT2Q9UHR6 403 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 RAB26Q9ULW5 256 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 COQ6Q9Y2Z9 468 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 STON1Q9Y6Q2 735 aa10.95□□□□□ -0.66
LIG3-204ENST00000585740 MGAT4DA6NG13 374 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 TMEM202A6NGA9 273 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 EPOPA6NHQ4 379 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 GPR89AB7ZAQ6 455 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 C9JVG2 144 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 H0YIV9 168 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 HNRNPRO43390 633 aaKnown RBP10.94□□□□□ -0.66
LIG3-204ENST00000585740 LILRB5O75023 590 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 MYO1DO94832 1006 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 C1orf105O95561 183 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 GPR89BP0CG08 455 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 BCKDHAP12694 445 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 C5AR1P21730 350 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 ITPKAP23677 461 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 PSMA4P25789 261 aaKnown RBP10.94□□□□□ -0.66
LIG3-204ENST00000585740 PBLDP30039 288 aaPredicted RBP10.94□□□□□ -0.66
LIG3-204ENST00000585740 GDI1P31150 447 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 PREPP48147 710 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 LIPEQ05469 1076 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 MED21Q13503 144 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 NAE1Q13564 534 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 GRM2Q14416 872 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 CAPRIN1Q14444 709 aaKnown RBP10.94□□□□□ -0.66
LIG3-204ENST00000585740 KIAA0040Q15053 153 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 AGERQ15109 404 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 FXNQ16595 210 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 MAPKAPK3Q16644 382 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 DPY19L1Q2PZI1 675 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 SFT2D3Q587I9 215 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.94□□□□□ -0.66
LIG3-204ENST00000585740 PIP5KL1Q5T9C9 394 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 EGFLAMQ63HQ2 1017 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 CAPN13Q6MZZ7 669 aaPredicted RBP10.94□□□□□ -0.66
LIG3-204ENST00000585740 NANOGP8Q6NSW7 305 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 UNC5DQ6UXZ4 953 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 TICAM1Q8IUC6 712 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 CFAP206Q8IYR0 622 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 TMEM102Q8N9M5 508 aaPredicted RBP10.94□□□□□ -0.66
LIG3-204ENST00000585740 DNAJB14Q8TBM8 379 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 STARD8Q92502 1023 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 COX14Q96I36 57 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 FCRL1Q96LA6 429 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 MYADMQ96S97 322 aa10.94□□□□□ -0.66
LIG3-204ENST00000585740 HBEGFQ99075 208 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms