RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 FBXO15Q8NCQ5 510 aaPredicted RBP12.66□□□□□ -0.38
ERBB2-220ENST00000584684 GIMAP7Q8NHV1 300 aa12.66□□□□□ -0.38
ERBB2-220ENST00000584684 C9orf43Q8TAL5 461 aaPredicted RBP12.66□□□□□ -0.38
ERBB2-220ENST00000584684 ADAMTS17Q8TE56 1095 aa12.66□□□□□ -0.38
ERBB2-220ENST00000584684 SKA2Q8WVK7 121 aaPredicted RBP12.66□□□□□ -0.38
ERBB2-220ENST00000584684 ZNF285Q96NJ3 590 aa12.66□□□□□ -0.38
ERBB2-220ENST00000584684 C20orf96Q9NUD7 363 aaPredicted RBP12.66□□□□□ -0.38
ERBB2-220ENST00000584684 TCFL5Q9UL49 500 aa12.66□□□□□ -0.38
ERBB2-220ENST00000584684 PYCARDQ9ULZ3 195 aa12.66□□□□□ -0.38
ERBB2-220ENST00000584684 RUVBL2Q9Y230 463 aaKnown RBP12.66□□□□□ -0.38
ERBB2-220ENST00000584684 MAN2B2Q9Y2E5 1009 aa12.66□□□□□ -0.38
ERBB2-220ENST00000584684 SAR1BQ9Y6B6 198 aa12.66□□□□□ -0.38
ERBB2-220ENST00000584684 ARHGEF33A8MVX0 844 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 TARM1B6A8C7 271 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 C9J4A7 227 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 CCDC188H7C350 402 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 J3QKU1 62 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 RFPL1O75677 317 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 CBSLP0DN79 551 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 CBSP35520 551 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 RPS18P62269 152 aaKnown RBP12.65□□□□□ -0.38
ERBB2-220ENST00000584684 CTBP1Q13363 440 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 DEFB110Q30KQ9 67 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 CCSMST1Q4G0I0 132 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 ACSBG2Q5FVE4 666 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.65□□□□□ -0.38
ERBB2-220ENST00000584684 LCN10Q6JVE6 187 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 ZNF549Q6P9A3 640 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 GALNT7Q86SF2 657 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 KCNMB4Q86W47 210 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 CNTN4Q8IWV2 1026 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 ENDOVQ8N8Q3 282 aaKnown RBP12.65□□□□□ -0.38
ERBB2-220ENST00000584684 GABPB2Q8TAK5 448 aaPredicted RBP12.65□□□□□ -0.38
ERBB2-220ENST00000584684 ZUFSPQ96AP4 578 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 GBP5Q96PP8 586 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 EBNA1BP2Q99848 306 aaKnown RBP12.65□□□□□ -0.38
ERBB2-220ENST00000584684 CCDC68Q9H2F9 335 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 FBXO6Q9NRD1 293 aaPredicted RBP12.65□□□□□ -0.38
ERBB2-220ENST00000584684 EURLQ9NYK6 297 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 GALPQ9UBC7 116 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 RNF14Q9UBS8 474 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 CIDEBQ9UHD4 219 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 FBXO5Q9UKT4 447 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 PADI2Q9Y2J8 665 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 HEMK1Q9Y5R4 338 aaPredicted RBP12.65□□□□□ -0.38
ERBB2-220ENST00000584684 FLNCQ14315 2725 aa12.65□□□□□ -0.38
ERBB2-220ENST00000584684 A0A1W2PPV9 198 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 MKRN2OSH3BPM6 223 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 FANCGO15287 622 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 SUV39H1O43463 412 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 CATP04040 527 aaKnown RBP12.64□□□□□ -0.39
ERBB2-220ENST00000584684 MPC1LP0DKB6 136 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 AGXTP21549 392 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 HSD17B2P37059 387 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 DR1Q01658 176 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 SF1Q15637 639 aaKnown RBP12.64□□□□□ -0.39
ERBB2-220ENST00000584684 KLHL38Q2WGJ6 581 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 PTCHD3Q3KNS1 767 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 HSP90AA5PQ58FG0 334 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 ZC3H12BQ5HYM0 836 aaKnown RBP12.64□□□□□ -0.39
ERBB2-220ENST00000584684 SPANXN3Q5MJ09 141 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 YOD1Q5VVQ6 348 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-220ENST00000584684 FCRL6Q6DN72 434 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 LRRC8EQ6NSJ5 796 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 KIAA0408Q6ZU52 694 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 TAX1BP1Q86VP1 789 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 C2CD4AQ8NCU7 369 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-220ENST00000584684 OR2L3Q8NG85 312 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 OR2A1Q8NGT9 310 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 OR9A1PQ8NGU1 263 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 CD200R1Q8TD46 325 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 ASB11Q8WXH4 323 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 DLG3Q92796 817 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 FAM136AQ96C01 138 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 LRRC39Q96DD0 335 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 ABHD17AQ96GS6 310 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 CAPZA3Q96KX2 299 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 SLC30A3Q99726 388 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 NDC1Q9BTX1 674 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 SLC7A5P2Q9GIP4 190 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 SPRTNQ9H040 489 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-220ENST00000584684 SNX7Q9UNH6 387 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 DHRS7Q9Y394 339 aa12.64□□□□□ -0.39
ERBB2-220ENST00000584684 FLNBO75369 2602 aaKnown RBP12.64□□□□□ -0.39
ERBB2-220ENST00000584684 PCM1Q15154 2024 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 ZNF839A8K0R7 811 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 GFYI3L273 518 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 SLC28A2O43868 658 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 SEC31AO94979 1220 aaKnown RBP12.63□□□□□ -0.39
ERBB2-220ENST00000584684 ONECUT2O95948 504 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 CD63P08962 238 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 GRIA3P42263 894 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 DCDP81605 110 aaKnown RBP12.63□□□□□ -0.39
ERBB2-220ENST00000584684 DHX9Q08211 1270 aaKnown RBP12.63□□□□□ -0.39
ERBB2-220ENST00000584684 CBLBQ13191 982 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 FRG1Q14331 258 aaKnown RBP12.63□□□□□ -0.39
ERBB2-220ENST00000584684 MSS51Q4VC12 460 aa12.63□□□□□ -0.39
ERBB2-220ENST00000584684 LACTB2Q53H82 288 aaPredicted RBP12.63□□□□□ -0.39
ERBB2-220ENST00000584684 TCTE1Q5JU00 501 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms