RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MTFMTQ96DP5 389 aaKnown RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 C3orf30Q96M34 536 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 CDRT15Q96T59 188 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 MIPEPQ99797 713 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 GABRG3Q99928 467 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 TMEM79Q9BSE2 394 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 SLC17A9Q9BYT1 436 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 ATG10Q9H0Y0 220 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 DPEP2Q9H4A9 486 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 WDR41Q9HAD4 459 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 PREBQ9HCU5 417 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 NMRK1Q9NWW6 199 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 NOP53Q9NZM5 478 aaKnown RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 CROTQ9UKG9 612 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 ANGPTL2Q9UKU9 493 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 CNOT6Q9ULM6 557 aaKnown RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 RNF11Q9Y3C5 154 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 KCNE2Q9Y6J6 123 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 CKAP5Q14008 2032 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 GON4LQ3T8J9 2241 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 A0A1W2PQU0 124 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 DYTNA2CJ06 578 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 CCDC154A6NI56 674 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 A8MUI8 341 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 K7ESM1 405 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 MANBAO00462 879 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 SPINT1O43278 529 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PLRG1O43660 514 aaKnown RBP9.03□□□□□ -0.96
SS18-220ENST00000582092 KDM1AO60341 852 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 KCNJ13O60928 360 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 SLC22A3O75751 556 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 GM2AP17900 193 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 ITGAXP20702 1163 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 KELP23276 732 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 TEAD1P28347 426 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 HSD17B2P37059 387 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PHEXP78562 749 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 CDK3Q00526 305 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 EMX2Q04743 252 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 TRAF3Q13114 568 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 CHIT1Q13231 466 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 SRSF5Q13243 272 aaKnown RBP9.03□□□□□ -0.96
SS18-220ENST00000582092 GRB7Q14451 532 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 INPP5AQ14642 412 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PUM1Q14671 1186 aaKnown RBP eCLIP9.03□□□□□ -0.96
SS18-220ENST00000582092 KPNB1Q14974 876 aaKnown RBP9.03□□□□□ -0.96
SS18-220ENST00000582092 CSRP2Q16527 193 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 CPSF6Q16630 551 aaKnown RBP eCLIP9.03□□□□□ -0.96
SS18-220ENST00000582092 SMU1Q2TAY7 513 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PLK5Q496M5 336 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 LIPJQ5W064 366 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 OGFOD2Q6N063 350 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PRMT9Q6P2P2 845 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PAOXQ6QHF9 649 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 TMEM92Q6UXU6 159 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 UNC5DQ6UXZ4 953 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 USP30Q70CQ3 517 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 LPCAT2Q7L5N7 544 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 FAM124AQ86V42 546 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 THOC6Q86W42 341 aaKnown RBP9.03□□□□□ -0.96
SS18-220ENST00000582092 HORMAD1Q86X24 394 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PLA2G15Q8NCC3 412 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 OR9A1PQ8NGU1 263 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 TSPEARQ8WU66 669 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 UTP4Q969X6 686 aaKnown RBP9.03□□□□□ -0.96
SS18-220ENST00000582092 RAD51AP1Q96B01 352 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PYCR2Q96C36 320 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 ROPN1LQ96C74 230 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 LINC00615Q96LM1 132 aaPredicted RBP9.03□□□□□ -0.96
SS18-220ENST00000582092 NPAS2Q99743 824 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 TPSD1Q9BZJ3 242 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 DENND2DQ9H6A0 471 aaPredicted RBP9.03□□□□□ -0.96
SS18-220ENST00000582092 ZNF385DQ9H6B1 395 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 RMI1Q9H9A7 625 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 LRTM1Q9HBL6 345 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 ITM2CQ9NQX7 267 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 TMEM45AQ9NWC5 275 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 CDV3Q9UKY7 258 aaKnown RBP9.03□□□□□ -0.96
SS18-220ENST00000582092 ACSL5Q9ULC5 683 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 FZD4Q9ULV1 537 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 SLC22A14Q9Y267 594 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 ASF1AQ9Y294 204 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PTGDR2Q9Y5Y4 395 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PLXNB3Q9ULL4 1909 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 GVINP1Q7Z2Y8 2422 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 ANKRD12Q6UB98 2062 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PIKFYVEQ9Y2I7 2098 aa9.03□□□□□ -0.96
SS18-220ENST00000582092 PLXNA2O75051 1894 aa9.02□□□□□ -0.96
SS18-220ENST00000582092 FAM234BA2RU67 622 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 TMEM202A6NGA9 273 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 ARHGEF33A8MVX0 844 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 H0Y3Z8 333 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 FPGTO14772 594 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 SLC31A1O15431 190 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 SGTAO43765 313 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 UGDHO60701 494 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 ADAM23O75077 832 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 NDUFS2O75306 463 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 FKBP6O75344 327 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 EPN2O95208 641 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms