RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 DNMT3AQ9Y6K1 912 aaPredicted RBP5.96□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SCN8AQ9UQD0 1980 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PABPN1LA6NDY0 278 aaKnown RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 B4DGG1 531 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 GPR89AB7ZAQ6 455 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TNFRSF10CO14798 259 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CASC3O15234 703 aaKnown RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 HRO43593 1189 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PLXNA2O75051 1894 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 DCTN3O75935 186 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ETHE1O95571 254 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 OTCP00480 354 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PDYNP01213 254 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TNFP01375 233 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 FGF4P08620 206 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 GPR89BP0CG08 455 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 UROSP10746 265 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ERGP11308 486 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 HGFP14210 728 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 EPB42P16452 691 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 NPPBP16860 134 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 JUNDP17535 347 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 KELP23276 732 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 HTR1BP28222 390 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 HMOX2P30519 316 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SLC19A1P41440 591 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SCTRP47872 440 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 DHPSP49366 369 aaPredicted RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 DIO3P55073 304 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PKNOX1P55347 436 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 NXPH1P58417 271 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PPP1CAP62136 330 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 YPEL5P62699 121 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SNRPNP63162 240 aaKnown RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 IRF8Q02556 426 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 GALNT1Q10472 559 aaPredicted RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 BNIP1Q12981 228 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 KLF10Q13118 480 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 DDX39BQ13838 428 aaKnown RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SLBPQ14493 270 aaKnown RBP eCLIP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 LPAL2Q16609 132 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CYP2A13Q16696 494 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 USP39Q53GS9 565 aaKnown RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 XKR6Q5GH73 641 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CDKL4Q5MAI5 379 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PRAMEF13Q5VWM6 474 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PAOXQ6QHF9 649 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 IL27RAQ6UWB1 636 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SLCO4C1Q6ZQN7 724 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 RINLQ6ZS11 566 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 Q6ZSR9 355 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ACAD11Q709F0 780 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 LARP4Q71RC2 724 aaKnown RBP eCLIP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 VN1R5Q7Z5H4 357 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TAF8Q7Z7C8 310 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 WDR5BQ86VZ2 330 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 RGL4Q8IZJ4 473 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TCAIMQ8N3R3 496 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 FBXL6Q8N531 539 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 EFCAB3Q8N7B9 438 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 FBXO15Q8NCQ5 510 aaPredicted RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 OR2I1PQ8NGU4 316 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 METTL6Q8TCB7 284 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 GPBAR1Q8TDU6 330 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ACTRT2Q8TDY3 377 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 LMX1AQ8TE12 382 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TUBGCP3Q96CW5 907 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 FAR2Q96K12 515 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SPACA7Q96KW9 195 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 LRRC37BQ96QE4 947 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 MIPEPQ99797 713 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PLCD4Q9BRC7 762 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CCDC28BQ9BUN5 200 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 NUSAP1Q9BXS6 441 aaKnown RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ACPTQ9BZG2 426 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 KLHL25Q9H0H3 589 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TRIT1Q9H3H1 467 aaKnown RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SMOC1Q9H4F8 434 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SLC6A20Q9NP91 592 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TMEM74BQ9NUR3 256 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 VTI1BQ9UEU0 232 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 APOBEC3BQ9UH17 382 aaKnown RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TAC3Q9UHF0 121 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TRPS1Q9UHF7 1281 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ACSL5Q9ULC5 683 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SLC12A4Q9UP95 1085 aa5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 APOBEC2Q9Y235 224 aaKnown RBP5.95□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PRUNE2Q8WUY3 3088 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 IGKV1-8A0A0C4DH67 115 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 LOC100653049A0A140TA62 436 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 FEZF1A0PJY2 475 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TRPC5OSA6NMA1 111 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SLCO1B7G3V0H7 640 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TLR4O00206 839 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SAP18O00422 153 aaKnown RBP5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 BTN3A3O00478 584 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 UBDO15205 165 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 LAMTOR5O43504 91 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PRAMEF10O60809 474 aa5.94□□□□□ -1.46
RNU4ATAC-201ENST00000580972 KRT34O76011 436 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms