RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CCM2Q9BSQ5 444 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 BTBD1Q9H0C5 482 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 C6orf106Q9H6K1 298 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 WDR26Q9H7D7 661 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 UBAP1Q9NZ09 502 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ZNHIT2Q9UHR6 403 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PLEKHM1Q9Y4G2 1056 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SLCO1B1Q9Y6L6 691 aa12.36□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FBP2O00757 339 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RECKO95980 971 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 UQCRBP14927 111 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 HSPA7P48741 367 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NRF1Q16656 503 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TPRG1LQ5T0D9 272 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PYCR2Q96C36 320 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CDK15Q96Q40 435 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TUBB1Q9H4B7 451 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PSMD13Q9UNM6 376 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PDE10AQ9Y233 779 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 DTNAQ9Y4J8 743 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CFAP20Q9Y6A4 193 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TAPBPO15533 448 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FTH1P02794 183 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PIM1P11309 404 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RPL10P27635 214 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SYTL3Q4VX76 610 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 C6orf52Q5T4I8 152 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 IL23RQ5VWK5 629 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 KANK2Q63ZY3 851 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 UBE2R2Q712K3 238 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ASZ1Q8WWH4 475 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TOE1Q96GM8 510 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SLC25A23Q9BV35 468 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FAM126AQ9BYI3 521 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MRGBPQ9NV56 204 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 POLG2Q9UHN1 485 aa12.35□□□□□ -0.43
CDK5RAP3-217ENST00000580287 NRP2O60462 931 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 AP2A2O94973 939 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CHEK2O96017 543 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FGF4P08620 206 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TRIM23P36406 574 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RPIAP49247 311 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 GBX1Q14549 363 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PDK3Q15120 406 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ADAMTSL4Q6UY14 1074 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SYT13Q7L8C5 426 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CHST15Q7LFX5 561 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SYVN1Q86TM6 617 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SATL1Q86VE3 508 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CDYL2Q8N8U2 506 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ASB11Q8WXH4 323 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TMEM159Q96B96 161 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CNBD2Q96M20 576 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 HBEGFQ99075 208 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TBC1D17Q9HA65 648 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ITM2CQ9NQX7 267 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 WNT16Q9UBV4 365 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PCDHGA7Q9Y5G6 932 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PEX1O43933 1283 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PDGFBP01127 241 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 RPS17P08708 135 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 LBPP18428 481 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 DGKEP52429 567 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 CDKL1Q00532 357 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 MAP7D1Q3KQU3 841 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 VPS26BQ4G0F5 336 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 USP30Q70CQ3 517 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ADAMTSL2Q86TH1 951 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TSTD1Q8NFU3 115 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 OR52B6Q8NGF0 335 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 TEX101Q9BY14 249 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FBRSQ9HAH7 460 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 POLMQ9NP87 494 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 ARL15Q9NXU5 204 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 BCAP29Q9UHQ4 241 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 PCTPQ9UKL6 214 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 FZD4Q9ULV1 537 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 BDP1A6H8Y1 2624 aa12.34□□□□□ -0.43
CDK5RAP3-217ENST00000580287 SLC5A10A0PJK1 596 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PRORSD1PA6NEY8 169 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NUAK1O60285 661 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 KATNA1O75449 491 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLCO2B1O94956 709 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR4F21O95013 312 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 S100BP04271 92 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 BDKRB1P46663 353 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 STARD6P59095 220 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PRKCQQ04759 706 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 KIAA1161Q6NSJ0 714 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 IYDQ6PHW0 289 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MIER2Q8N344 545 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ICA1LQ8NDH6 482 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR56A4Q8NGH8 313 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MSANTD3Q96H12 275 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 LRGUKQ96M69 825 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C1orf50Q9BV19 199 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GPR174Q9BXC1 333 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ATG10Q9H0Y0 220 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 IRF2BPLQ9H1B7 796 aa12.33□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZNF225Q9UK10 706 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms