RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 GFRA3O60609 400 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 NOL3O60936 208 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 E2F6O75461 281 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 STC2O76061 302 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SLC25A14O95258 325 aaPredicted RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 MATN4O95460 622 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 PRAMEF1O95521 474 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 PRAMEF12O95522 483 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 IGLV3-27P01718 113 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 GPIP06744 558 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ZNF7P17097 686 aaPredicted RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 RPS9P46781 194 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 STT3AP46977 705 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 TM4SF4P48230 202 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 RPS6KA3P51812 740 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 CHRNB3Q05901 458 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 MAP4K2Q12851 820 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 APOFQ13790 326 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 VEPH1Q14D04 833 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 AAK1Q2M2I8 961 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 PABPC1LQ4VXU2 614 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 CTSL3PQ5NE16 218 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ADGRF1Q5T601 910 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 GPR107Q5VW38 600 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 LCN8Q6JVE9 175 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 Q6ZS46 218 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SERPINA9Q86WD7 417 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 KIAA2013Q8IYS2 634 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 TBC1D21Q8IYX1 336 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 OSCP1Q8WVF1 389 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 BIRC7Q96CA5 298 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 DTNBP1Q96EV8 351 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ASIC4Q96FT7 647 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 Q96M66 194 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 BOCQ9BWV1 1114 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 NUSAP1Q9BXS6 441 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 RPF2Q9H7B2 306 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 ARMC1Q9NVT9 282 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 RHBDL2Q9NX52 303 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ATXN10Q9UBB4 475 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ZNF225Q9UK10 706 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 CEPT1Q9Y6K0 416 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 H3BM21 787 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 STX16O14662 325 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SEC22BO75396 215 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SNAP29O95721 258 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ESR1P03372 595 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ITGALP20701 1170 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 IL12AP29459 219 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 PTGER3P43115 390 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 GALK1P51570 392 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 GTF2H2Q13888 395 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 RCAN2Q14206 197 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 PTGR1Q14914 329 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 NHSL2Q5HYW2 709 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 MZT2BQ6NZ67 158 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 GTF2H2CQ6P1K8 395 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 CYP20A1Q6UW02 462 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 GALNT5Q7Z7M9 940 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ADAMTSL2Q86TH1 951 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 EPHX4Q8IUS5 362 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SFRP1Q8N474 314 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 TMEM199Q8N511 208 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 KLHL23Q8NBE8 558 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 TNIP2Q8NFZ5 429 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SEPT8Q92599 483 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 TFAP2CQ92754 450 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 EZH1Q92800 747 aaPredicted RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 FAM162AQ96A26 154 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 TADA1Q96BN2 335 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 MYRFLQ96LU7 910 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 CDK5RAP1Q96SZ6 601 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 BDH2Q9BUT1 245 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ANKRD60Q9BZ19 345 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 DPY30Q9C005 99 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 RNF38Q9H0F5 515 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SMPD3Q9NY59 655 aaPredicted RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 IL37Q9NZH6 218 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ZNF711Q9Y462 761 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 NYNRINQ9P2P1 1898 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 FAM92AA1XBS5 289 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 FAM234BA2RU67 622 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 H0YJX3 145 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 FFAR2O15552 330 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 FOXD2O60548 495 aaPredicted RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 PQBP1O60828 265 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 VNN2O95498 520 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 GSNP06396 782 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 AKT1P31749 480 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ARF5P84085 180 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SP3Q02447 781 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 TNK2Q07912 1038 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ILF2Q12905 390 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 SELPLGQ14242 412 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 CPSF6Q16630 551 aaKnown RBP eCLIP5.24□□□□□ -1.57
VAPA-203ENST00000577539 RFTN2Q52LD8 501 aaPredicted RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 GTF2IRD2BQ6EKJ0 949 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 OGFOD2Q6N063 350 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ABRAXAS1Q6UWZ7 409 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 Q6ZSR9 355 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms