RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 OR8K5Q8NH50 307 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 UHMK1Q8TAS1 419 aaKnown RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 UBLCP1Q8WVY7 318 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 N4BP2L2Q92802 583 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 USP7Q93009 1102 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 TCTN2Q96GX1 697 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 PRR11Q96HE9 360 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 OR2A14Q96R47 310 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 CAB39LQ9H9S4 337 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 ASCL3Q9NQ33 180 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 ARL15Q9NXU5 204 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 SPHK1Q9NYA1 384 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 UTP6Q9NYH9 597 aaKnown RBP12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 RARRES3Q9UL19 164 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 PDE10AQ9Y233 779 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 PCDHGA3Q9Y5H0 932 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 ACACAQ13085 2346 aa12.33□□□□□ -0.44
TRAPPC1-206ENST00000573989 AKAP13Q12802 2813 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 TPRP12270 2363 aaKnown RBP12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 A0A087X1B8 175 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 A0A1W2PNU3 283 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 PHGDHO43175 533 aaKnown RBP12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 SLC16A8O95907 504 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 MYBL2P10244 700 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 ST6GAL1P15907 406 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 TYK2P29597 1187 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 CMPK1P30085 196 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 SLC5A2P31639 672 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 SLC26A3P40879 764 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 ETV5P41161 510 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 TUBB3Q13509 450 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 THEMIS2Q5TEJ8 643 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 TMEM207Q6UWW9 146 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 PPP1R3BQ86XI6 285 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 RASGRP3Q8IV61 690 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 C2orf73Q8N5S3 287 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 BMPERQ8N8U9 685 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 C19orf47Q8N9M1 422 aaKnown RBP12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 LMNTD1Q8N9Z9 388 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 KDF1Q8NAX2 398 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 ZNF248Q8NDW4 579 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 DENND1AQ8TEH3 1009 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 ZNF480Q8WV37 535 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 ZUFSPQ96AP4 578 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 TRAPPC9Q96Q05 1148 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 OR6C1Q96RD1 312 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 NRTNQ99748 197 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 TXLNGYQ9BZA5 131 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 TWSG1Q9GZX9 223 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 CHRNA10Q9GZZ6 450 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 PCBD2Q9H0N5 130 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 PPCSQ9HAB8 311 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 NMRAL1Q9HBL8 299 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 CCDC177Q9NQR7 707 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 FETUBQ9UGM5 382 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 ADAMTS6Q9UKP5 1117 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 ACOT9Q9Y305 439 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 ADAMTS20P59510 1910 aa12.32□□□□□ -0.44
TRAPPC1-206ENST00000573989 CHD8Q9HCK8 2581 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 NPEPPSL1A6NEC2 478 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 E7ENX8 843 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 RRP8O43159 456 aaKnown RBP12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 PRAMEF10O60809 474 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 ANXA5P08758 320 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 MSL3P1P0C860 447 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 IMPA1P29218 277 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 PEBP1P30086 187 aaKnown RBP12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 PGGT1BP53609 377 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 VSNL1P62760 191 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 SH3BP2P78314 561 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 TAP2Q03519 686 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 BMPR2Q13873 1038 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 CSHL1Q14406 222 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 FAM83EQ2M2I3 478 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 ERCC6LQ2NKX8 1250 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 KLC3Q6P597 504 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 EMBQ6PCB8 327 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 LRRC69Q6ZNQ3 347 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 SNIP1Q8TAD8 396 aaKnown RBP12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 ANKRD49Q8WVL7 239 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 DLG3Q92796 817 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 MTBPQ96DY7 904 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 PPM1MQ96MI6 270 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 TSNARE1Q96NA8 513 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 FCRL4Q96PJ5 515 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 EGFL8Q99944 293 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 MRPS30Q9NP92 439 aaKnown RBP12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 SNX15Q9NRS6 342 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 FGF21Q9NSA1 209 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 SIDT1Q9NXL6 827 aaKnown RBP12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 STOX2Q9P2F5 926 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 ACSL6Q9UKU0 697 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 OARD1Q9Y530 152 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 B3GALT1Q9Y5Z6 326 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 V9GYY5 206 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 HEATR5BQ9P2D3 2071 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 ACACBO00763 2458 aa12.31□□□□□ -0.44
TRAPPC1-206ENST00000573989 IQANK1A0A1B0GTG1 560 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 CCDC189A1A4V9 331 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms