RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	SMC6	Q96SB8	1091 aa		13.95	□□□□□ -0.18
ABR-223	ENST00000573895	TRIT1	Q9H3H1	467 aa	Known RBP	13.95	□□□□□ -0.18
ABR-223	ENST00000573895	TFB2M	Q9H5Q4	396 aa	Known RBP	13.95	□□□□□ -0.18
ABR-223	ENST00000573895	SYTL2	Q9HCH5	934 aa		13.95	□□□□□ -0.18
ABR-223	ENST00000573895	HRASLS2	Q9NWW9	162 aa		13.95	□□□□□ -0.18
ABR-223	ENST00000573895	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.95	□□□□□ -0.18
ABR-223	ENST00000573895	FAM8A1	Q9UBU6	413 aa		13.95	□□□□□ -0.18
ABR-223	ENST00000573895	DCDC2	Q9UHG0	476 aa		13.95	□□□□□ -0.18
ABR-223	ENST00000573895	PILRA	Q9UKJ1	303 aa		13.95	□□□□□ -0.18
ABR-223	ENST00000573895	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.95	□□□□□ -0.18
ABR-223	ENST00000573895	PRSS21	Q9Y6M0	314 aa		13.95	□□□□□ -0.18
ABR-223	ENST00000573895		A0A087X1B8	175 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	SLC5A10	A0PJK1	596 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	TLCD2	A6NGC4	264 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895		E5RI56	91 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	ERVH48-1	M5A8F1	160 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	EFS	O43281	561 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	KRT4	P19013	534 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	FDXR	P22570	491 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	PDHA2	P29803	388 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	CCT5	P48643	541 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	CSRP3	P50461	194 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	MAGOH	P61326	146 aa	Known RBP	13.94	□□□□□ -0.18
ABR-223	ENST00000573895	SLC18A2	Q05940	514 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	BOP1	Q14137	746 aa	Known RBP	13.94	□□□□□ -0.18
ABR-223	ENST00000573895	MAP7	Q14244	749 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	KRT33B	Q14525	404 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.94	□□□□□ -0.18
ABR-223	ENST00000573895	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.94	□□□□□ -0.18
ABR-223	ENST00000573895	TAF1B	Q53T94	588 aa	Predicted RBP	13.94	□□□□□ -0.18
ABR-223	ENST00000573895	TTMP	Q5BVD1	217 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	RBM20	Q5T481	1227 aa	Known RBP	13.94	□□□□□ -0.18
ABR-223	ENST00000573895	ARHGAP40	Q5TG30	622 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	DUS1L	Q6P1R4	473 aa	Known RBP	13.94	□□□□□ -0.18
ABR-223	ENST00000573895	FAM92B	Q6ZTR7	304 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	SH2D5	Q6ZV89	423 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	RAPH1	Q70E73	1250 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	TFG	Q92734	400 aa	Predicted RBP	13.94	□□□□□ -0.18
ABR-223	ENST00000573895	INPP5D	Q92835	1189 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	SLC41A2	Q96JW4	573 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	FCRL4	Q96PJ5	515 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	FERD3L	Q96RJ6	166 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	NDN	Q99608	321 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	SNX15	Q9NRS6	342 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	FAM53C	Q9NYF3	392 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	ACOT9	Q9Y305	439 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895	DHRS7	Q9Y394	339 aa		13.94	□□□□□ -0.18
ABR-223	ENST00000573895		A0A096LPK6	155 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	IGHV5-51	A0A0C4DH38	117 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	OR6C74	A6NCV1	312 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	ATXN7	O15265	892 aa	Predicted RBP	13.93	□□□□□ -0.18
ABR-223	ENST00000573895	KIF1C	O43896	1103 aa	Known RBP	13.93	□□□□□ -0.18
ABR-223	ENST00000573895	C2	P06681	752 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	GSTA1	P08263	222 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	PYGB	P11216	843 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	FGF5	P12034	268 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	SAT1	P21673	171 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	MAP4	P27816	1152 aa	Known RBP	13.93	□□□□□ -0.18
ABR-223	ENST00000573895	ACADL	P28330	430 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	SEPHS1	P49903	392 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	SLC18A1	P54219	525 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	CDKN2D	P55273	166 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	PRKAA1	Q13131	559 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	CTSL3P	Q5NE16	218 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	ARMC6	Q6NXE6	501 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	TBC1D21	Q8IYX1	336 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	ZSCAN1	Q8NBB4	408 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	LCN9	Q8WX39	176 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	ELMO1	Q92556	727 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	SRMS	Q9H3Y6	488 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	APMAP	Q9HDC9	416 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	MKS1	Q9NXB0	559 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	POLG2	Q9UHN1	485 aa		13.93	□□□□□ -0.18
ABR-223	ENST00000573895	SEC16A	O15027	2179 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	COL6A6	A6NMZ7	2263 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	CCDC189	A1A4V9	331 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	EIF3F	O00303	357 aa	Predicted RBP	13.92	□□□□□ -0.18
ABR-223	ENST00000573895	RAD1	O60671	282 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	ZBTB11	O95625	1053 aa	Predicted RBP	13.92	□□□□□ -0.18
ABR-223	ENST00000573895	DLGAP3	O95886	979 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	F7	P08709	466 aa	Predicted RBP	13.92	□□□□□ -0.18
ABR-223	ENST00000573895	CRHR1	P34998	444 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	CCNF	P41002	786 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	PREP	P48147	710 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	PPP1CA	P62136	330 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	HSD11B2	P80365	405 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
ABR-223	ENST00000573895	ACY1	Q03154	408 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	FOXM1	Q08050	763 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	PDAP1	Q13442	181 aa	Known RBP	13.92	□□□□□ -0.18
ABR-223	ENST00000573895	TTLL9	Q3SXZ7	439 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
ABR-223	ENST00000573895	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.92	□□□□□ -0.18
ABR-223	ENST00000573895	CEP97	Q8IW35	865 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	CACNA2D3	Q8IZS8	1091 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	NLGN4X	Q8N0W4	816 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	D2HGDH	Q8N465	521 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	NKAP	Q8N5F7	415 aa	Known RBP	13.92	□□□□□ -0.18
ABR-223	ENST00000573895	ARFGAP2	Q8N6H7	521 aa		13.92	□□□□□ -0.18
ABR-223	ENST00000573895	IL22RA1	Q8N6P7	574 aa		13.92	□□□□□ -0.18

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