RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SEPHS1P49903 392 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 KIR2DS3Q14952 304 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 ARHGAP19Q14CB8 494 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 TGIF1Q15583 401 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 EMBQ6PCB8 327 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 RAPH1Q70E73 1250 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 KMT5CQ86Y97 462 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 CEP97Q8IW35 865 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 ADGRF3Q8IZF5 1079 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 OR2L8Q8NGY9 312 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 UHMK1Q8TAS1 419 aaKnown RBP13.09□□□□□ -0.31
RPAIN-213ENST00000573577 UBLCP1Q8WVY7 318 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-213ENST00000573577 HIST1H2AHQ96KK5 128 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 TEFMQ96QE5 360 aaKnown RBP13.09□□□□□ -0.31
RPAIN-213ENST00000573577 HIST1H2AJQ99878 128 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 ZPBPQ9BS86 351 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 H2AFJQ9BTM1 129 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 SLC12A9Q9BXP2 914 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 TRIM54Q9BYV2 358 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 PARVBQ9HBI1 364 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 ACTR10Q9NZ32 417 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 SEMA5BQ9P283 1151 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 FETUBQ9UGM5 382 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 ZNF180Q9UJW8 692 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 POMT2Q9UKY4 750 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 PLAGL1Q9UM63 463 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 ADAMTS20P59510 1910 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 IGHV5-51A0A0C4DH38 117 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 POLR1CO15160 346 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-213ENST00000573577 FKBP9O95302 570 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 TSPAN12O95859 305 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 SYF2O95926 243 aaKnown RBP13.08□□□□□ -0.32
RPAIN-213ENST00000573577 ENO2P09104 434 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-213ENST00000573577 TPBGLP0DKB5 382 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 NELFEP18615 380 aaKnown RBP13.08□□□□□ -0.32
RPAIN-213ENST00000573577 CDH3P22223 829 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 PRDX3P30048 256 aaKnown RBP13.08□□□□□ -0.32
RPAIN-213ENST00000573577 ARL4DP49703 201 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 SERPINB8P50452 374 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 TMPRSS3P57727 454 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 GRB7Q14451 532 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 SLC29A2Q14542 456 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 ZNF460Q14592 562 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 ZKSCAN8Q15776 578 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-213ENST00000573577 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.08□□□□□ -0.32
RPAIN-213ENST00000573577 UBAP2Q5T6F2 1119 aaKnown RBP13.08□□□□□ -0.32
RPAIN-213ENST00000573577 MROH9Q5TGP6 573 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 CEACAM20Q6UY09 585 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 ADAMTSL2Q86TH1 951 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 DTX1Q86Y01 620 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 HMGCLL1Q8TB92 370 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 SLC41A2Q96JW4 573 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 CCDC138Q96M89 665 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 MAP3K3Q99759 626 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 CTRCQ99895 268 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 MENTQ9BUN1 341 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 DERL2Q9GZP9 239 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 PRORYQ9H606 182 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 PPCSQ9HAB8 311 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 APMAPQ9HDC9 416 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 C1GALT1Q9NS00 363 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 NOVA2Q9UNW9 492 aaKnown RBP13.08□□□□□ -0.32
RPAIN-213ENST00000573577 PCDHB11Q9Y5F2 797 aa13.08□□□□□ -0.32
RPAIN-213ENST00000573577 NBEAQ8NFP9 2946 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 ISM1B1AKI9 464 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 PHGDHO43175 533 aaKnown RBP13.07□□□□□ -0.32
RPAIN-213ENST00000573577 ZBTB11O95625 1053 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-213ENST00000573577 SLC26A3P40879 764 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 KPNA2P52292 529 aaKnown RBP13.07□□□□□ -0.32
RPAIN-213ENST00000573577 AP1S2P56377 157 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 ATP6V0D1P61421 351 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 CXADRP78310 365 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 SH3BP2P78314 561 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 FOXM1Q08050 763 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 CYP2A13Q16696 494 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 CCSMST1Q4G0I0 132 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 TAF1BQ53T94 588 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-213ENST00000573577 FBXO38Q6PIJ6 1188 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 SPESP1Q6UW49 350 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 TMEM207Q6UWW9 146 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 TBC1D1Q86TI0 1168 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-213ENST00000573577 RASGRP3Q8IV61 690 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 SYTL1Q8IYJ3 562 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 IL17FQ96PD4 163 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 OR6C1Q96RD1 312 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 CCNL2Q96S94 520 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-213ENST00000573577 PKP4Q99569 1192 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 NRTNQ99748 197 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 PARD6BQ9BYG5 372 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 CPNE5Q9HCH3 593 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 WDR70Q9NW82 654 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 CTNNAL1Q9UBT7 734 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 CIDEBQ9UHD4 219 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 TLK1Q9UKI8 766 aa13.07□□□□□ -0.32
RPAIN-213ENST00000573577 AHCTF1Q8WYP5 2266 aa13.06□□□□□ -0.32
RPAIN-213ENST00000573577 ZFYVE26Q68DK2 2539 aa13.06□□□□□ -0.32
RPAIN-213ENST00000573577 A0A087X1B8 175 aa13.06□□□□□ -0.32
RPAIN-213ENST00000573577 WISP3O95389 354 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms