RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 RFPL1O75677 317 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 CEACAM4O75871 244 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 FKBP9O95302 570 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 GNG11P61952 73 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 TIAL1Q01085 375 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMG6-212ENST00000573153 TLE1Q04724 770 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 CHAF1BQ13112 559 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 PPP1R7Q15435 360 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 ACSBG2Q5FVE4 666 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 COLEC12Q5KU26 742 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 SYDE1Q6ZW31 735 aaPredicted RBP16.64■□□□□ 0.25
SMG6-212ENST00000573153 PCGF5Q86SE9 256 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 OTUD6BQ8N6M0 293 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 SEC14L1Q92503 715 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 SLC22A18Q96BI1 424 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 FAM136AQ96C01 138 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 CLIP3Q96DZ5 547 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 RUNDC3BQ96NL0 473 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 WDR83Q9BRX9 315 aaKnown RBP16.64■□□□□ 0.25
SMG6-212ENST00000573153 EURLQ9NYK6 297 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 DHCR7Q9UBM7 475 aaKnown RBP16.64■□□□□ 0.25
SMG6-212ENST00000573153 SERTAD3Q9UJW9 196 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 PYCARDQ9ULZ3 195 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 MAN2B2Q9Y2E5 1009 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 CRYL1Q9Y2S2 319 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 FAM169AQ9Y6X4 670 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 ARHGEF33A8MVX0 844 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 TP73O15350 636 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 CTSVO60911 334 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 OR2B3O76000 313 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 MED26O95402 600 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 ONECUT2O95948 504 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 KLK3P07288 261 aaPredicted RBP16.63■□□□□ 0.25
SMG6-212ENST00000573153 PKMP14618 531 aaKnown RBP16.63■□□□□ 0.25
SMG6-212ENST00000573153 CCNFP41002 786 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 CASRP41180 1078 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 SLC1A2P43004 574 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 RPS15P62841 145 aaKnown RBP16.63■□□□□ 0.25
SMG6-212ENST00000573153 FASTKQ14296 549 aaKnown RBP16.63■□□□□ 0.25
SMG6-212ENST00000573153 CYP2A13Q16696 494 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 LONRF1Q17RB8 773 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 LACTB2Q53H82 288 aaPredicted RBP16.63■□□□□ 0.25
SMG6-212ENST00000573153 ZNF470Q6ECI4 717 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 MRPL14Q6P1L8 145 aaKnown RBP16.63■□□□□ 0.25
SMG6-212ENST00000573153 OR2A1Q8NGT9 310 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 GSDMBQ8TAX9 411 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 CALML6Q8TD86 181 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 THAP4Q8WY91 577 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 RAD51AP1Q96B01 352 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 NAPGQ99747 312 aaPredicted RBP16.63■□□□□ 0.25
SMG6-212ENST00000573153 PLCL2Q9UPR0 1127 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 HEMK1Q9Y5R4 338 aaPredicted RBP16.63■□□□□ 0.25
SMG6-212ENST00000573153 SAR1BQ9Y6B6 198 aa16.63■□□□□ 0.25
SMG6-212ENST00000573153 TNRC6AQ8NDV7 1962 aaKnown RBP16.63■□□□□ 0.25
SMG6-212ENST00000573153 PCM1Q15154 2024 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 ZSCAN9O15535 394 aaPredicted RBP16.62■□□□□ 0.25
SMG6-212ENST00000573153 PSIP1O75475 530 aaKnown RBP16.62■□□□□ 0.25
SMG6-212ENST00000573153 GRIA3P42263 894 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 CTBP1Q13363 440 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 THOC5Q13769 683 aaKnown RBP16.62■□□□□ 0.25
SMG6-212ENST00000573153 MSS51Q4VC12 460 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 CNSTQ6PJW8 725 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 NEK10Q6ZWH5 1172 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 LRRC56Q8IYG6 542 aaPredicted RBP16.62■□□□□ 0.25
SMG6-212ENST00000573153 DTWD1Q8N5C7 304 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 ZNF655Q8N720 491 aaPredicted RBP16.62■□□□□ 0.25
SMG6-212ENST00000573153 KCNJ9Q92806 393 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 FOPNLQ96NB1 174 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 DPH2Q9BQC3 489 aaPredicted RBP16.62■□□□□ 0.25
SMG6-212ENST00000573153 NAT9Q9BTE0 207 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 RNF14Q9UBS8 474 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 ASIC3Q9UHC3 531 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 ANAPC2Q9UJX6 822 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 COMMD10Q9Y6G5 202 aa16.62■□□□□ 0.25
SMG6-212ENST00000573153 IGKV1-8A0A0C4DH67 115 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 CTAGE9A4FU28 777 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 ARGFXA6NJG6 315 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 MYO1CO00159 1063 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 SMAPO00193 183 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 BANF1O75531 89 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 TTC4O95801 387 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 UMODP07911 640 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 HBQ1P09105 142 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 PGAM1P18669 254 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 MCM3P25205 808 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 GABRB3P28472 473 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 CSRP3P50461 194 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 MPP1Q00013 466 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 MORF4L2Q15014 288 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 C1orf189Q5VU69 101 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 TTC23LQ6PF05 361 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 FIGLAQ6QHK4 219 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 CYHR1Q6ZMK1 362 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 COX15Q7KZN9 410 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 MCATQ8IVS2 390 aaKnown RBP16.61■□□□□ 0.25
SMG6-212ENST00000573153 IGDCC3Q8IVU1 814 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMG6-212ENST00000573153 OR2L3Q8NG85 312 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 PROKR1Q8TCW9 393 aa16.61■□□□□ 0.25
SMG6-212ENST00000573153 MAGEC3Q8TD91 643 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms