RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 RTN4RL1Q86UN2 441 aaPredicted RBP16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 SERPINA9Q86WD7 417 aa16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 ZNF540Q8NDQ6 660 aa16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 ASPSCR1Q9BZE9 553 aa16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 GPR63Q9BZJ6 419 aa16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 GABARAPL1Q9H0R8 117 aa16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 PCDHB9Q9Y5E1 797 aa16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 GMPPBQ9Y5P6 360 aa16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 PRSS21Q9Y6M0 314 aa16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 THSD7BQ9C0I4 1608 aa16.47■□□□□ 0.23
PCDHB19P-201ENST00000570871 ILVBLA1L0T0 632 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 MTMR11A4FU01 709 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 GOLGA8CPA6NN73 597 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 ZBBXA8MT70 800 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 MYO1GB0I1T2 1018 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 H0Y626 953 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 WDR47O94967 919 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 TRIM16O95361 564 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 EPHA2P29317 976 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 S100A3P33764 101 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 RGS4P49798 205 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 ST13P50502 369 aaKnown RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 SLC14A1Q13336 389 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 CATSPEREQ5SY80 951 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 FAM171A1Q5VUB5 890 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 KDM4DQ6B0I6 523 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 RNF165Q6ZSG1 346 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 C16orf59Q7L2K0 433 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 TMEM132CQ8N3T6 1108 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 ULK4Q96C45 1275 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 MYOCQ99972 504 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 NTMT1Q9BV86 223 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 SPC25Q9HBM1 224 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 TRPS1Q9UHF7 1281 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 MAN2B2Q9Y2E5 1009 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 GPC6Q9Y625 555 aaPredicted RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 FRMPD3Q5JV73 1810 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 CLDN11O75508 207 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 DIRAS1O95057 198 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 SLC25A14O95258 325 aaPredicted RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 CD160O95971 181 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 ALPIP09923 528 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 HOXB9P17482 250 aaPredicted RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 SLC11A2P49281 568 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 CXCR4P61073 352 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 RPS14P62263 151 aaKnown RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 ARF5P84085 180 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 ZNF177Q13360 481 aaPredicted RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 KEAP1Q14145 624 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 RNF219Q5W0B1 726 aaPredicted RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 OR2T5Q6IEZ7 315 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 TMEM53Q6P2H8 277 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 NCEH1Q6PIU2 408 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 RSPO2Q6UXX9 243 aaPredicted RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 RNF19BQ6ZMZ0 732 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 SNX20Q7Z614 316 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 SLC22A16Q86VW1 577 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 OR2T29Q8NH02 315 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 USP7Q93009 1102 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 CEP295NLQ96MC4 621 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 ACPTQ9BZG2 426 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 SLIRPQ9GZT3 109 aaKnown RBP16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 ACOT13Q9NPJ3 140 aa16.46■□□□□ 0.23
PCDHB19P-201ENST00000570871 WNT9AO14904 365 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 RGS10O43665 173 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 GJB5O95377 273 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 C1QCP02747 245 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 EBLN1P0CF75 366 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 ZNF7P17097 686 aaPredicted RBP16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 GRK3P35626 688 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 ABHD18Q0P651 414 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 PAGE2Q7Z2X7 111 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 PARVBQ9HBI1 364 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 SCHIP1Q9P0W5 487 aaPredicted RBP16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 DNMT3LQ9UJW3 386 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 PNMA8BQ9ULN7 279 aaPredicted RBP16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 HSPE1-MOB4S4R3N1 261 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 hCG_2039718K7EN88 272 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 GAPDHSO14556 408 aaPredicted RBP16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 SYN3O14994 580 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 FAM20BO75063 409 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 SEC24AO95486 1093 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 PRAMEF1O95521 474 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 EPB42P16452 691 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 DGKAP23743 735 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 TACR1P25103 407 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 HOXA9P31269 272 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 HMGCLP35914 325 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 DUSP4Q13115 394 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 MTA1Q13330 715 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 CPSF6Q16630 551 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 DOK6Q6PKX4 331 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 CERS6Q6ZMG9 384 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 GALNT10Q86SR1 603 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 TTC29Q8NA56 475 aaPredicted RBP16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 DNAJB8Q8NHS0 232 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 UBE2FQ969M7 185 aa16.45■□□□□ 0.22
PCDHB19P-201ENST00000570871 LGALS12Q96DT0 336 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms