RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SETDB1Q15047 1291 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 CHI3L2Q15782 390 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 RBBP7Q16576 425 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 CAPN13Q6MZZ7 669 aaPredicted RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 IYDQ6PHW0 289 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 AGTRAPQ6RW13 159 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 CYHR1Q6ZMK1 362 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 MBOAT1Q6ZNC8 495 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 PRR23CQ6ZRP0 262 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 LRRC70Q7Z2Q7 622 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 OOSP2Q86WS3 158 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 MYLK4Q86YV6 388 aaPredicted RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 C10orf107Q8IVU9 208 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 NAGSQ8N159 534 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SFRP1Q8N474 314 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 AFAP1L2Q8N4X5 818 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SNX31Q8N9S9 440 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SUMF1Q8NBK3 374 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR6C4Q8NGE1 309 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR2I1PQ8NGU4 316 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR4C6Q8NH72 309 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR10G6Q8NH81 332 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 RAB3IL1Q8TBN0 382 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 MDM1Q8TC05 714 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SAP25Q8TEE9 199 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 UBTD2Q8WUN7 234 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 PATE1Q8WXA2 126 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 NAT6Q93015 286 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 ATP6V1E2Q96A05 226 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 AHCYL2Q96HN2 611 aaKnown RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 CAMK1GQ96NX5 476 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 GPR78Q96P69 363 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 PKP4Q99569 1192 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC38A3Q99624 504 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 MECRQ9BV79 373 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 ERVK-6Q9BXR3 956 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 C12orf65Q9H3J6 166 aaKnown RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SYNDIG1Q9H7V2 258 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 IL21RQ9HBE5 538 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 TMEM9BQ9NQ34 198 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SEMA4GQ9NTN9 838 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 STOX2Q9P2F5 926 aaPredicted RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 GMPR2Q9P2T1 348 aaKnown RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 IKZF3Q9UKT9 509 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 DYRK1BQ9Y463 629 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 ST14Q9Y5Y6 855 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 BDP1A6H8Y1 2624 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 KRT87PA6NCN2 255 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 LILRA5A6NI73 299 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 C2orf74A8MZ97 194 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 TMEM114B3SHH9 223 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 G3V2L1 256 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 K7EPI3 171 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 MATN2O00339 956 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 DUX1O43812 170 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 NOBOXO60393 691 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 DLX3O60479 287 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 STK16O75716 305 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 SUPT7LO94864 414 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 MLYCDO95822 493 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 EML2O95834 649 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF883P0CG24 379 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 EPB42P16452 691 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 BGNP21810 368 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 IMPA1P29218 277 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 PKLRP30613 574 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 SERPINB5P36952 375 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ETV4P43268 484 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 FASLGP48023 281 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 HSPA7P48741 367 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 DUSP3P51452 185 aaPredicted RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 PSMA6P60900 246 aaKnown RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 UBE2IP63279 158 aaKnown RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 BNIP3Q12983 259 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 NAE1Q13564 534 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 NAA25Q14CX7 972 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 SF3A2Q15428 464 aaKnown RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 CSRP2Q16527 193 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 PDK4Q16654 411 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 PTCHD3Q3KNS1 767 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 CCSMST1Q4G0I0 132 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 C4orf17Q53FE4 359 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 PRAMEF13Q5VWM6 474 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 METTL2BQ6P1Q9 378 aaKnown RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 XKR5Q6UX68 686 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZCCHC23Q6ZST2 131 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 TMEM26Q6ZUK4 368 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ADCK2Q7Z695 626 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 AMIGO1Q86WK6 493 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 KIRREL3Q8IZU9 778 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ARL14Q8N4G2 192 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 EID2Q8N6I1 236 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 PPFIBP2Q8ND30 876 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR2L8Q8NGY9 312 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 SETD7Q8WTS6 366 aaKnown RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF480Q8WV37 535 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZFPM2Q8WW38 1151 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 JPH3Q8WXH2 748 aaPredicted RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 SMPDL3AQ92484 453 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 DLG3Q92796 817 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms