RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 SPTBP11277 2137 aa8.59□□□□□ -1.03
NPLOC4-204ENST00000570324 A0A1B0GX78 115 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 MAGEB16A2A368 324 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 HCRTR1O43613 425 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 C1orf105O95561 183 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 ESR1P03372 595 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 ERVK-10P10266 1014 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 BDKRB1P46663 353 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 GABRA4P48169 554 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 RAPSNQ13702 412 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 GRM7Q14831 915 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 NAA25Q14CX7 972 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 FAM214AQ32MH5 1076 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 TTLL9Q3SXZ7 439 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 YOD1Q5VVQ6 348 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 ZNF385CQ66K41 422 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 MRGPREQ86SM8 312 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 LMNTD1Q8N9Z9 388 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 LINC01555Q8NAE3 123 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 OR2Y1Q8NGV0 311 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 TM9SF4Q92544 642 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 MAGOHBQ96A72 148 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 MIB2Q96AX9 1013 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 FAM136AQ96C01 138 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 PBKQ96KB5 322 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 NAP1L3Q99457 506 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 KIFC1Q9BW19 673 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 NUDT9Q9BW91 350 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 SLC29A3Q9BZD2 475 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 MLXIPLQ9NP71 852 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 ATP13A2Q9NQ11 1180 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 FAM114A2Q9NRY5 505 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 CUTCQ9NTM9 273 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 PPP2R2CQ9Y2T4 447 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 NFS1Q9Y697 457 aa8.58□□□□□ -1.04
NPLOC4-204ENST00000570324 MYO18BQ8IUG5 2567 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 GOLGA6L10A0A0M3HER8 536 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 TCRBV7S3A2A0A539 114 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 SDR42E2A6NKP2 422 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 ZNF839A8K0R7 811 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 TARM1B6A8C7 271 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 DSCR3O14972 297 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 SRPX2O60687 465 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 NIPSNAP2O75323 286 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 AVILO75366 819 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 KLF7O75840 302 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 CEACAM4O75871 244 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 IPO13O94829 963 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 CATP04040 527 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 EIF2S1P05198 315 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 CTSBP07858 339 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 PKMP14618 531 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 ITGAXP20702 1163 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 OGNP20774 298 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 VARSP26640 1264 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 CMPK1P30085 196 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 RPA3P35244 121 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 CD97P48960 835 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 VSX2P58304 361 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 DHX34Q14147 1143 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 GRB7Q14451 532 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 ANKRD20A4Q4UJ75 823 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 CTSL3PQ5NE16 218 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 DCAF10Q5QP82 559 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 WASHC2DQ5SRD0 308 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 ARMC3Q5W041 872 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 PAPD7Q5XG87 772 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 FCRL6Q6DN72 434 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 KIAA0930Q6ICG6 404 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 NEPROQ6NW34 567 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 JMJD6Q6NYC1 403 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 GALNT16Q8N428 558 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 FAM26EQ8N5C1 309 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 PRELID2Q8N945 189 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 LPGAT1Q92604 370 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 COL26A1Q96A83 441 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 ZNF669Q96BR6 464 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 MIPEPQ99797 713 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 ACAT2Q9BWD1 397 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 LRRC4CQ9HCJ2 640 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 XAB2Q9HCS7 855 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 ABCF3Q9NUQ8 709 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 P4HTMQ9NXG6 502 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 UTP6Q9NYH9 597 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 IL1RAPL1Q9NZN1 696 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 SPATA7Q9P0W8 599 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 LUZP4Q9P127 313 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 C5AR2Q9P296 337 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 ANKMY1Q9P2S6 941 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 CDC23Q9UJX2 597 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 RUVBL2Q9Y230 463 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 JRKLQ9Y4A0 524 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 MAD1L1Q9Y6D9 718 aa8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 TLN1Q9Y490 2541 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-204ENST00000570324 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 A0A0J9YVX5 310 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 HYKKA2RU49 373 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 H3BMH7 237 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 GOLGA8MH3BSY2 632 aa8.56□□□□□ -1.04
NPLOC4-204ENST00000570324 VPS26AO75436 327 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms