RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CCDC137Q6PK04 289 aaKnown RBP16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CFAP61Q8NHU2 1237 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FKBP10Q96AY3 582 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SERPINB12Q96P63 405 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SLC25A23Q9BV35 468 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SAMD15Q9P1V8 674 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MDC1Q14676 2089 aaKnown RBP16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZCWPW2A0A1B0GU75 182 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FITM1A5D6W6 292 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ARGFXA6NJG6 315 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 IGHEP01854 428 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FMO4P31512 558 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ARHGAP19Q14CB8 494 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NKAIN1Q4KMZ8 207 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ANKRD20A4Q4UJ75 823 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FCRL6Q6DN72 434 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FIGLAQ6QHK4 219 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CES3Q6UWW8 571 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MCATQ8IVS2 390 aaKnown RBP16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 OTUD6BQ8N6M0 293 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZNF655Q8N720 491 aaPredicted RBP16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NAT8LQ8N9F0 302 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TEX19Q8NA77 164 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FBXO15Q8NCQ5 510 aaPredicted RBP16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 OR2Y1Q8NGV0 311 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 GRK7Q8WTQ7 553 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SLCO2A1Q92959 643 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MS4A14Q96JA4 679 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 IL17FQ96PD4 163 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 OSBPL9Q96SU4 736 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NDC1Q9BTX1 674 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 WDR54Q9H977 334 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TXLNGQ9NUQ3 528 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NFS1Q9Y697 457 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 RELNP78509 3460 aa16.41■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PTPN13Q12923 2485 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 A0A1W2PPV9 198 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CLEC18AA5D8T8 446 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MYO1CO00159 1063 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZSCAN12O43309 604 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SRPX2O60687 465 aaPredicted RBP16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PHF2O75151 1096 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NIPSNAP2O75323 286 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PSIP1O75475 530 aaKnown RBP16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 USP1O94782 785 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ALBP02768 609 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CTSBP07858 339 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PKMP14618 531 aaKnown RBP16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NR1D1P20393 614 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 GRIA3P42263 894 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 VPS41P49754 854 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CLCN7P51798 805 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PGDP52209 483 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 DHX34Q14147 1143 aaKnown RBP16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SF1Q15637 639 aaKnown RBP16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CLEC18BQ6UXF7 455 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MRGPREQ86SM8 312 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CLEC18CQ8NCF0 446 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 OR2A1Q8NGT9 310 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 KCNJ9Q92806 393 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MIB2Q96AX9 1013 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SIGLEC10Q96LC7 697 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SLC26A1Q9H2B4 701 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 DHCR7Q9UBM7 475 aaKnown RBP16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZNF451Q9Y4E5 1061 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 COMMD10Q9Y6G5 202 aa16.4■□□□□ 0.22
MAP1LC3B-208ENST00000570189 A0A1B0GX78 115 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GOLGA8KD6RF30 607 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GOLGA8TH3BQL2 631 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 EIF3FO00303 357 aaPredicted RBP16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ITGAXP20702 1163 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 BDKRB1P46663 353 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SOX8P57073 446 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GRM7Q14831 915 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CCSMST1Q4G0I0 132 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CASC4Q6P4E1 433 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 OR2L3Q8NG85 312 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CALML6Q8TD86 181 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 COG1Q8WTW3 980 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PTERQ96BW5 349 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SMAD5Q99717 465 aaKnown RBP16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FAM114A2Q9NRY5 505 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 IL1RAPL1Q9NZN1 696 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 IFT80Q9P2H3 777 aaPredicted RBP16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ANKMY1Q9P2S6 941 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 NDOR1Q9UHB4 597 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GPN3Q9UHW5 284 aaPredicted RBP16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CRYL1Q9Y2S2 319 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 MED16Q9Y2X0 877 aa16.39■□□□□ 0.21
MAP1LC3B-208ENST00000570189 DOCK10Q96BY6 2186 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SHANK1Q9Y566 2161 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GOLGA6L10A0A0M3HER8 536 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 OR2A25A4D2G3 310 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 DSCR3O14972 297 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 KLHL41O60662 606 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CNOT3O75175 753 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PIM1P11309 404 aaPredicted RBP16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 HSD17B2P37059 387 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FOLR3P41439 243 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms