RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 WSB2Q9NYS7 404 aaPredicted RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 PRAMEF33A0A0G2JMD5 474 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 CLGNO14967 610 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 ULK1O75385 1050 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 WFS1O76024 890 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 THRAP10827 490 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 VARSP26640 1264 aaKnown RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 NUDT2P50583 147 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 CCR3P51677 355 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 DOC2AQ14183 400 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 CLCA4Q14CN2 919 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 GGTA1PQ4G0N0 100 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 ATP6AP1LQ52LC2 224 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 XKR6Q5GH73 641 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 CAPRIN2Q6IMN6 1127 aaKnown RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 CYB5D1Q6P9G0 228 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 DCUN1D3Q8IWE4 304 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 FAM13CQ8NE31 585 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 OR5K2Q8NHB8 316 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 MAFAQ8NHW3 353 aaPredicted RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 CCL4L1Q8NHW4 92 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 NEIL2Q969S2 332 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 ACPTQ9BZG2 426 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 RMI1Q9H9A7 625 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 TBC1D17Q9HA65 648 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 PRDM8Q9NQV8 689 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 GPR45Q9Y5Y3 372 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 OR52A4PA6NMU1 304 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 PNLIPRP1P54315 467 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 ERVK-8P63133 956 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 YBX1P67809 324 aaKnown RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 IRF8Q02556 426 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 HERC3Q15034 1050 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 RFTN2Q52LD8 501 aaPredicted RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 HABP4Q5JVS0 413 aaKnown RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 KIAA0895LQ68EN5 471 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 RGL4Q8IZJ4 473 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 MCUR1Q96AQ8 359 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 C12orf66Q96MD2 445 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 RAB3IPQ96QF0 476 aaPredicted RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 OR2M4Q96R27 311 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 RTKNQ9BST9 563 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 MENTQ9BUN1 341 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 SDR39U1Q9NRG7 319 aaPredicted RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 AIG1Q9NVV5 245 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 SCHIP1Q9P0W5 487 aaPredicted RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 INVSQ9Y283 1065 aa10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 MRPS17Q9Y2R5 130 aaKnown RBP10.6□□□□□ -0.71
PDXDC1-216ENST00000569715 LAMA1P25391 3075 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 IFRD1O00458 451 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 FBP2O00757 339 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 EML2O95834 649 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 AK4P27144 223 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 AKT2P31751 481 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 PGM1P36871 562 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 ATP4BP51164 291 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 STX1BP61266 288 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 AP5B1Q2VPB7 878 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 SLC22A18ASQ8N1D0 253 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 EFCAB3Q8N7B9 438 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 OR13H1Q8NG92 308 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 NUDT8Q8WV74 236 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 WDR92Q96MX6 357 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 THTPAQ9BU02 230 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 SGPP1Q9BX95 441 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 C1orf21Q9H246 121 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 IMP3Q9NV31 184 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 POLR3HQ9Y535 204 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 HOXC4P09017 264 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 NPPBP16860 134 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 CD6P30203 668 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 RPL38P63173 70 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 CATSPEREQ5SY80 951 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 Q6ZSR6 202 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 TRIM46Q7Z4K8 759 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 MIER2Q8N344 545 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 DEFB119Q8N690 84 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 SELENOMQ8WWX9 145 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 CCT7Q99832 543 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 ACSL5Q9ULC5 683 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 PLXND1Q9Y4D7 1925 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 ARHGEF17Q96PE2 2063 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 IGHV1OR15-9A0A0B4J2B8 117 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 SORBS2O94875 1100 aaKnown RBP10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 IDO1P14902 403 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 JUPP14923 745 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 MNAT1P51948 309 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 CAPN13Q6MZZ7 669 aaPredicted RBP10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 SPATA19Q7Z5L4 167 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 TMPRSS11BQ86T26 416 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 DEFB107AQ8IZN7 70 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 SNX19Q92543 992 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 RAD51AP1Q96B01 352 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 ELOVL6Q9H5J4 265 aa10.59□□□□□ -0.71
PDXDC1-216ENST00000569715 PDZK1P1A8MUH7 402 aa10.58□□□□□ -0.72
PDXDC1-216ENST00000569715 NR5A2O00482 541 aa10.58□□□□□ -0.72
PDXDC1-216ENST00000569715 KRT6AP02538 564 aa10.58□□□□□ -0.72
PDXDC1-216ENST00000569715 KRT6BP04259 564 aa10.58□□□□□ -0.72
PDXDC1-216ENST00000569715 ZFP36L2P47974 494 aaKnown RBP10.58□□□□□ -0.72
PDXDC1-216ENST00000569715 KRT6CP48668 564 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms