RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CCL5P13501 91 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 CD9P21926 228 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 HTR1EP28566 365 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 ESRRGP62508 458 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 CYP4F3Q08477 520 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 CDKN3Q16667 212 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 SLC36A3Q495N2 470 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 INTS11Q5TA45 600 aaKnown RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 GPR107Q5VW38 600 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 ANKRD26P1Q6NSI1 321 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 C22orf39Q6P5X5 142 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 SPESP1Q6UW49 350 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 TPRG1Q6ZUI0 275 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 Q6ZVL8 140 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 GPR141Q7Z602 305 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 LILRA3Q8N6C8 439 aaPredicted RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 ELMO1Q92556 727 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 PDLIM5Q96HC4 596 aaKnown RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 MTERF1Q99551 399 aaKnown RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 SLC25A37Q9NYZ2 338 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 PTTG2Q9NZH5 202 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 DNMT3BQ9UBC3 853 aaKnown RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 STOML2Q9UJZ1 356 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 RANBP2P49792 3224 aaKnown RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 FGF18O76093 207 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 FCGR1AP12314 374 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 ENDOUP21128 410 aaKnown RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 PPP3CCP48454 512 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 MASP1P48740 699 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 VEGFBP49765 207 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 SEC13P55735 322 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 PIGFQ07326 219 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 GRIK2Q13002 908 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 SPIDRQ14159 915 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 NKG7Q16617 165 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 ZXDCQ2QGD7 858 aaPredicted RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 LRRC23Q53EV4 343 aaPredicted RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 CYBRD1Q53TN4 286 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 CNKSR3Q6P9H4 555 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 CEP68Q76N32 757 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 PROSER1Q86XN7 944 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 PTRH1Q86Y79 214 aaKnown RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 TSPEARQ8WU66 669 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 SCRN2Q96FV2 425 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 APIPQ96GX9 242 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 HHIPL1Q96JK4 782 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 P2RY13Q9BPV8 354 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 POLR1BQ9H9Y6 1135 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 ZDHHC3Q9NYG2 299 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 MAGEL2Q9UJ55 1249 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 PCDHB14Q9Y5E9 798 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 TMEM202A6NGA9 273 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 LRRC72A6NJI9 287 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 H0YJX3 145 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 SLC28A1O00337 649 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 DIRAS1O95057 198 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ZNF682O95780 498 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 EFEMP2O95967 443 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 KRT6AP02538 564 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 KRT6BP04259 564 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 OR56A5P0C7T3 313 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 NR4A1P22736 598 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CAPGP40121 348 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ETV3P41162 512 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 RECQLP46063 649 aaPredicted RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 KRT6CP48668 564 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CASP9P55211 416 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 NTHL1P78549 312 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 VAC14Q08AM6 782 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 FIBINQ8TAL6 211 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 OSCP1Q8WVF1 389 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 FAM120BQ96EK7 910 aaKnown RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ITCHQ96J02 903 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 C1orf109Q9NX04 203 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 PKD2L2Q9NZM6 624 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 TMCO1Q9UM00 188 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CCL27Q9Y4X3 112 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 HCFC2Q9Y5Z7 792 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CROCCQ5TZA2 2017 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 A0A087WXM4 84 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 PIP5K1CO60331 668 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 DEAF1O75398 565 aaPredicted RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CPSF4O95639 269 aaKnown RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ASLP04424 464 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 EBLN1P0CF75 366 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CDH1P12830 882 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 RPS3P23396 243 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 MYF6P23409 242 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 S100A3P33764 101 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CDKN2CP42773 168 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 PREPP48147 710 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 RPS14P62263 151 aaKnown RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 PHC1P78364 1004 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 PLPP4Q5VZY2 271 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 OR4F3Q6IEY1 312 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 NEK5Q6P3R8 708 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ABRAXAS1Q6UWZ7 409 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 MACC1Q6ZN28 852 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ZDHHC13Q8IUH4 622 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ELMOD1Q8N336 334 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms