RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 RPS14P62263 151 aaKnown RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 TBCEQ15813 527 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 TSTQ16762 297 aaKnown RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 KIAA1161Q6NSJ0 714 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 GADL1Q6ZQY3 521 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 SSX9Q7RTT3 188 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 DGLUCYQ7Z3D6 616 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ZSCAN1Q8NBB4 408 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 OR1J4Q8NGS1 313 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 FAM151AQ8WW52 585 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CPNE2Q96FN4 548 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ALPK1Q96QP1 1244 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 TRIB3Q96RU7 358 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 PRMT8Q9NR22 394 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 SEC14L3Q9UDX4 400 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 TSR3Q9UJK0 312 aaKnown RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CA5BQ9Y2D0 317 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CASZ1Q86V15 1759 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CDC7O00311 574 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 LYRM1O43325 122 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 NME6O75414 186 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 IFNA2P01563 188 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 LHCGRP22888 699 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 VARSP26640 1264 aaKnown RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 KCNJ11Q14654 390 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 AKR1C8PQ5T2L2 129 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CERCAMQ5T4B2 595 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF425Q6IV72 752 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 AADACL2Q6P093 401 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 FAM122BQ7Z309 247 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 TRIM46Q7Z4K8 759 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF283Q8N7M2 679 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CMASQ8NFW8 434 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 SLC22A17Q8WUG5 538 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 RIT1Q92963 219 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ADAM2Q99965 735 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 LPIN3Q9BQK8 851 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 NDC1Q9BTX1 674 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 TNFSF13BQ9Y275 285 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 PADI2Q9Y2J8 665 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 A0A0D9SG52 128 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 PRAMEF22A3QJZ6 481 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ANXA2P2A6NMY6 339 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 SLC43A1O75387 559 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 STK16O75716 305 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CDRT1O95170 752 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 STAU1O95793 577 aaKnown RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 LALBAP00709 142 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ANXA2P07355 339 aaKnown RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 RETP07949 1114 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 TAS2R41P59536 307 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 E2F1Q01094 437 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 SLC25A52Q3SY17 297 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 RFPL4BQ6ZWI9 263 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 LINGO2Q7L985 606 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CMC1Q7Z7K0 106 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ACOT1Q86TX2 421 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ADAMTS19Q8TE59 1207 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 MASTLQ96GX5 879 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 HSD17B14Q9BPX1 270 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 MTFR1LQ9H019 292 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 WASH6PQ9NQA3 447 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF69Q9UC07 566 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 EBF1Q9UH73 591 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 SYNDIG1LA6NDD5 238 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 KCNAB2Q13303 367 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ARMC12Q5T9G4 340 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 SIGIRRQ6IA17 410 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 C3P1Q6ZMU1 363 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CNOT9Q92600 299 aaKnown RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 KAZALD1Q96I82 304 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 MUS81Q96NY9 551 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 TTYH2Q9BSA4 534 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.97□□□□□ -1.298e-8■■■□□ 16.6
CNOT1-216ENST00000569240 DNAJC5BQ9UF47 199 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 TRPV2Q9Y5S1 764 aa6.97□□□□□ -1.29
CNOT1-216ENST00000569240 ZCCHC11Q5TAX3 1644 aaKnown RBP6.97□□□□□ -1.29
CNOT1-216ENST00000569240 MEIOCA2RUB1 952 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 ISM1B1AKI9 464 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 STMND1H3BQB6 276 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 SC5DO75845 299 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 IGSF6O95976 241 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 ITGAMP11215 1152 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 HLA-DMAP28067 261 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 CENPAP49450 140 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 SLC9B1Q4ZJI4 515 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 PET117Q6UWS5 81 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 RANBP3LQ86VV4 465 aaPredicted RBP6.96□□□□□ -1.29
CNOT1-216ENST00000569240 LGI4Q8N135 537 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 ACBD4Q8NC06 268 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 OR4C6Q8NH72 309 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 SNX33Q8WV41 574 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF471Q9BX82 626 aaPredicted RBP6.96□□□□□ -1.29
CNOT1-216ENST00000569240 ARL6Q9H0F7 186 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 ABCG5Q9H222 651 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 LIN28AQ9H9Z2 209 aaKnown RBP6.96□□□□□ -1.29
CNOT1-216ENST00000569240 WNT9AO14904 365 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 NOBOXO60393 691 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 UPP2O95045 317 aa6.96□□□□□ -1.29
CNOT1-216ENST00000569240 UCHL1P09936 223 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms